DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cnx99A and si:ch211-274f20.2

DIOPT Version :9

Sequence 1:NP_001036767.1 Gene:Cnx99A / 44643 FlyBaseID:FBgn0015622 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_001344439.4 Gene:si:ch211-274f20.2 / 100005358 ZFINID:ZDB-GENE-091204-91 Length:452 Species:Danio rerio


Alignment Length:505 Identity:167/505 - (33%)
Similarity:241/505 - (47%) Gaps:103/505 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 HFADHFDDVEESRKRWVLSQAKKDDIAEEISKYDGIWNWESPQRIVWANDLGLVLKSKAKHAAIA 137
            :||:.||:....|| ||||:|    :.:.: :|:|.|..|...:.....:.||||||..:|.||:
Zfish    39 YFAETFDEGALDRK-WVLSKA----VVKHL-RYNGEWAVEESIQPRLLGNKGLVLKSPGRHHAIS 97

  Fly   138 APLRKPFEFKSDKPLVVQYEVTLQEGQECGGSYLKLLSAGKDTEQLKAFNDKTPYTIMFGPDKCG 202
            |.||..:.|| ||||::||||:.|:|.:|||:|:||||...|. :|..|:|.||||||||||||.
Zfish    98 AYLRNIYHFK-DKPLILQYEVSFQKGIDCGGAYIKLLSQSDDL-RLSQFSDATPYTIMFGPDKCS 160

  Fly   203 NDVKMHFIFRHVNPINGTITEKHCNKPKNRLEEPFKDKLPHLYQLVVRPDNSFEIRVDHKIINEG 267
            ::.|:||||.|.|||..|..|||..:|:..|.:.|.|:..|||.|.:.|||:|||.||..:||:|
Zfish   161 SNHKIHFIFSHHNPITRTYEEKHARQPEMDLSDYFTDQQAHLYTLNLYPDNTFEILVDLTLINKG 225

  Fly   268 SLLTDFKPPVNPPAEIDDPNDHKPESWDEREKIPDPTAHKPEDWDEDAPPQLPDTDAVMPNGWLE 332
            |||.|...||   |..|...:|              ..::..|                    |.
Zfish   226 SLLEDMDTPV---ASSDQKQEH--------------LTNEASD--------------------LN 253

  Fly   333 DEPDMIFDPTATKPEDWDAEIDGEWEAPLVDNPVCEKAPGCGKWKAPLIPNPNYKGKWRAPMIEN 397
            .|..|..|....:..|                  |.:|..|.....|.....|           |
Zfish   254 LEQHMRSDGVDRQRND------------------CTEASVCEGSSRPASSGSN-----------N 289

  Fly   398 PNYQGKWAPRKIPNPDFFEDLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARDFAANSF 462
            |..|    |....|....:..:.|.|:||:|||.||||::.|::|||:::.||:||||.:..:::
Zfish   290 PKNQ----PSTNTNDKDNKGKQQFTMSPIAAVGFELWSLTGDVMFDNILLCDDLEVARRWTEDTW 350

  Fly   463 DIKRRYIDRESDSFVNKVVELAKANPSIWG-----IGLVAIVALVALTIYCRFGTAKSQDSAAKK 522
            .      .|::...:.|::......|.:||     :||..|:.:..:....||| ...||     
Zfish   351 G------QRQTPGMIEKLLMATVKRPWLWGVYVFTVGLPIILFVSLMWPDKRFG-PPDQD----- 403

  Fly   523 AAAEAKKSDDPQPDDEPEAEE----ESDERAAGDTSKESTPLSASPKKNQ 568
              ...||:|:||.|...:.||    :..|....:|  :|..:..:||..:
Zfish   404 --YYYKKTDEPQTDGPQDVEEHVTHDHGENQRVET--KSRVVKRAPKNTE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cnx99ANP_001036767.1 Calreticulin 74..447 CDD:278680 135/372 (36%)
si:ch211-274f20.2XP_001344439.4 Calreticulin 40..335 CDD:306718 135/372 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579030
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D230478at33208
OrthoFinder 1 1.000 - - FOG0001260
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102144
Panther 1 1.100 - - O PTHR11073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X875
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.