Sequence 1: | NP_001263046.1 | Gene: | Apc / 44642 | FlyBaseID: | FBgn0015589 | Length: | 2417 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001137312.1 | Gene: | apc / 386762 | ZFINID: | ZDB-GENE-031112-7 | Length: | 2754 | Species: | Danio rerio |
Alignment Length: | 3029 | Identity: | 736/3029 - (24%) |
---|---|---|---|
Similarity: | 1096/3029 - (36%) | Gaps: | 1071/3029 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 EGIAELSLEDVDVDSVPERKPHFL--DYDAVPPPDYEEGF---GASSG--------EQLKMDK-- 61
Fly 62 ---KYERDGEVSD-YELAASGYTKKEFTQDDNTLHFTQSAVGLGSGAVGKKPAAKHFLDENPIPP 122
Fly 123 DYML------------AQELREMREH-----RSLDRNFERQSAQQQQL--DELPPRN----GGGS 164
Fly 165 PASAGRPSRSK---EP-SYTLSRFLDGDAPAPAPR--LPKGAAWTTSFDERYTSSA--------- 214
Fly 215 VEATLGSKVECVYSLLSMLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQMMHAPDND-- 277
Fly 278 --------QEVRKCAGQALHNVVHSHPDEKAGRREAKVLRLLDQIVDYCSFLKTLLQSGGEAIAD 334
Fly 335 DSDRHPL---------AAISSLMKVSFDEEHRHAMCELGALHAIPNLVHLDHAVHGPKPEDQCCN 390
Fly 391 SLRRYALMALTNLTFGDENNKALLCGQKQFMEALVAQLDSAPDDLLQVTASVLRNLSWRADSNMK 455
Fly 456 AVLNEIGTVTALALAAMRNRSENTLKAILSALWNLSAHCSTNKAEFCAVDGALAFLVGMLSYEGP 520
Fly 521 SKTLKIIENAGGILRNVSSHIAVCEPYRQILRQHNCLAILLQQLKSESLTVVSNSCGTLWNLSAR 585
Fly 586 SAEDQKFLWDNGAVPMLRSLIHSKHAMISEGSSSALKNLLNFRPAVQNHHQLDPIARSMGLKALP 650
Fly 651 TLEARKAKALQQELGERHTAETCDNLDT------------------------------------- 678
Fly 679 -----------------------------GGKLDKERA--------------------------- 687
Fly 688 ----------SSSSRRHPAPRLTRSAML---TKSESRDSVYS-AKSD-----C--------AYDH 725
Fly 726 LIRSASASDAHRK---VKPKITDFDLEME-----------------------QDTEATEEQPIDY 764
Fly 765 SVKY--------------------------------------------------SENATKTSTYQ 779
Fly 780 ----ETDL------------------------------------DQPTDFSLRYAENQIESDLDI 804
Fly 805 SGPAGGQKSTITPPAETVPEKSEGQEILLILDDSVKCYQTEDTPYVISNAASVTDLRVAAK---- 865
Fly 866 ---ADAEAEVKPEVRE-------VTSKEGAPKKLPKLSQCGSGSYTPEKPINYCEEGTPGYFSRY 920
Fly 921 DSLSSLD------ESGKANQAIVGTDADIKPKLEKQEEQ------------ESQPA-EQVLTKPP 966
Fly 967 -------------------TQANS----------------ALETPLMFSRRSSMDSLVHDPDVDV 996
Fly 997 ANCDDKSSVVSD-FSRLASGVISPSEIPDSPTQSMPQS---------PRRNSVAGSGQNVDSPP- 1050
Fly 1051 ----------VVIPASLQPLRSVFEDD-LSSFNVEHTPAQFSTATSLSNLSI------------- 1091
Fly 1092 -----VDD------------------EKAPASV---------AEEDNEDELLLANCINMGM---- 1120
Fly 1121 QRKPTEAVKSTV------VNSEVDV--------------------AEETIRSYCTEDTPALLSKV 1159
Fly 1160 PSNTNLSVIS-------MSSTDPKDATAGQAQMYAHQLSDDVSSNASDCG-----------GASG 1206
Fly 1207 HLLQQCIRDGMKK---------------------PLGEATSDPIAMLRRGGNELPGYLPSADEMN 1250
Fly 1251 KFLVEDSPCNFSVVSGLSNLTVGSSLVGPAV---QLKETEPSSADQNP-----EMKAKPGKQEQV 1307
Fly 1308 RRP------PHW------------QDDSLSSLSIDSED--------------------------- 1327
Fly 1328 ---DTNLLSQAIAAGC---------NRPKSNLGFSSNGKRSSSLSSSQPIAINAATSASSLNSAM 1380
Fly 1381 TVRKSQQQESYSSVDSSDSNDNQSKSLFELCILKG---MYKTKEPGA-----RAQQMQEQPIVGS 1437
Fly 1438 SSVQSNPSLKQFDSLPVQLPSSGQVKRQRHHHHHHHHRERERERKDEKLLQECINTGISKKINAV 1502
Fly 1503 P------------KNVLATSAAALEPCHPMAATTSASALSTAA--PDVEQ---KAHATSNPQQQS 1550
Fly 1551 STHPSSHIL----PNPIDAIATVTD--TVRSP----------AAPNQGNGNASQNGLETATGSKD 1599
Fly 1600 LDSEDRSSDESNQSFIMETMVRLDSALNETCISGASEKHKDPDLMLKSVERLTMEFVTSAEQ--L 1662
Fly 1663 RSSSHNHSSSNSHKNNSSNNTWNESTCPNDVSFPSVSQTAPVLASL-----------SLDEDATE 1716
Fly 1717 ARSLHELIEITPTNEQQPESLEGETDTLVNGHADSYSGSSGGLNFQLGGQVQNAGVR-------- 1773
Fly 1774 -LEPQRLLFNGTS--------------ASIMTNSTMIAFEAR----ALAENLLQPAATDDDTTEM 1819
Fly 1820 TFSLNSLDLDNIRPPSGM-ESLNSCYQDHSQPSSLRQAMPSKSPRFARKMFPANLVARRALGHLA 1883
Fly 1884 GSAESVNSSCNLLDNIKPPSL--------------MDELLDSMISVDSIQSEVADGEQ------- 1927
Fly 1928 --DCSMATTISVSNYETAACDDQTMTVLQSCFDEDEDATMNDYSSAESTPKHGSTPSPNRRSLTP 1990
Fly 1991 KDKRRLTKDRFKTYTIATSCEMEAPEANETLQIEIVEAAVPVATPSPR-ANGRRRGSAERYKTQL 2054
Fly 2055 IECPLALIQPQPDDCPSEQLSSIRAMMQQFTFITDINIGHSQETCESTDHPEDAGESPECDQNSE 2119
Fly 2120 TESCDGQEPDQLPPPPSIVDLRTSVVKPTTLEPATAVKL-------VRGRKKPAYVSPYSMQS-- 2175
Fly 2176 ------QRNSNNAAPSKKKTLSPTIAKRSLVPGGSGVRLPAKKKPTPPPEPAPARLERQGTFVKD 2234
Fly 2235 EPTNSNV-----QVPVVETKP-----------------AQTSPTHRASKLPTKKGTASGGSPSKA 2277
Fly 2278 GSPKRIPLAPARRMTPQRANTSLRLAAG-KSHAASRVVS 2315 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apc | NP_001263046.1 | ARM | 222..316 | CDD:237987 | 51/103 (50%) |
armadillo repeat | 258..332 | CDD:293788 | 36/83 (43%) | ||
ARM | 332..448 | CDD:237987 | 66/124 (53%) | ||
armadillo repeat | 369..403 | CDD:293788 | 14/33 (42%) | ||
armadillo repeat | 411..448 | CDD:293788 | 23/36 (64%) | ||
armadillo repeat | 498..539 | CDD:293788 | 25/40 (63%) | ||
ARM | 506..624 | CDD:237987 | 78/117 (67%) | ||
armadillo repeat | 548..582 | CDD:293788 | 24/33 (73%) | ||
armadillo repeat | 590..624 | CDD:293788 | 21/33 (64%) | ||
APC_crr | 837..860 | CDD:283553 | 3/22 (14%) | ||
APC_crr | 903..927 | CDD:283553 | 13/23 (57%) | ||
APC_crr | 1066..1090 | CDD:283553 | 12/24 (50%) | ||
APC_crr | 1247..1271 | CDD:283553 | 2/23 (9%) | ||
apc | NP_001137312.1 | APC_N_CC | 4..55 | CDD:293294 | |
Suppressor_APC | 119..198 | CDD:288297 | 13/110 (12%) | ||
ARM | 305..407 | CDD:237987 | 49/101 (49%) | ||
ARM | 458..591 | CDD:237987 | 77/133 (58%) | ||
armadillo repeat | 459..502 | CDD:293788 | 21/43 (49%) | ||
armadillo repeat | 510..547 | CDD:293788 | 23/36 (64%) | ||
armadillo repeat | 554..589 | CDD:293788 | 17/34 (50%) | ||
armadillo repeat | 597..638 | CDD:293788 | 25/40 (63%) | ||
ARM | 604..725 | CDD:237987 | 80/120 (67%) | ||
armadillo repeat | 647..681 | CDD:293788 | 24/33 (73%) | ||
armadillo repeat | 689..723 | CDD:293788 | 21/33 (64%) | ||
Arm_APC_u3 | 726..996 | CDD:293235 | 44/274 (16%) | ||
APC_u5 | 1013..1111 | CDD:293236 | 7/97 (7%) | ||
APC_u9 | 1264..1341 | CDD:293239 | 16/80 (20%) | ||
APC_crr | 1344..1367 | CDD:283553 | 10/22 (45%) | ||
APC_crr | 1608..1632 | CDD:283553 | 8/23 (35%) | ||
APC_u13 | 1633..1684 | CDD:293240 | 10/53 (19%) | ||
APC_u14 | 1705..1804 | CDD:293241 | 19/117 (16%) | ||
APC_crr | 1806..1831 | CDD:283553 | 7/24 (29%) | ||
APC_u15 | 1838..1893 | CDD:293242 | 5/54 (9%) | ||
SAMP | 1981..2000 | CDD:283554 | 8/18 (44%) | ||
APC_basic | 2172..2506 | CDD:283581 | 71/431 (16%) | ||
EB1_binding | 2593..2754 | CDD:283565 | 42/187 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580925 | |
Domainoid | 1 | 1.000 | 198 | 1.000 | Domainoid score | I3030 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 519 | 1.000 | Inparanoid score | I1233 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002986 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6551 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105450 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2812 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.880 |