Sequence 1: | NP_001263046.1 | Gene: | Apc / 44642 | FlyBaseID: | FBgn0015589 | Length: | 2417 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006254568.1 | Gene: | Apc / 24205 | RGDID: | 2123 | Length: | 2870 | Species: | Rattus norvegicus |
Alignment Length: | 2981 | Identity: | 738/2981 - (24%) |
---|---|---|---|
Similarity: | 1084/2981 - (36%) | Gaps: | 1093/2981 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 115 LDENPIPPDYML------------AQELREMREH-----RSLDRNFERQSAQQQQL--DELPPRN 160
Fly 161 GGGSPAS-AGRPSRSKE--PSYTLSRFLDGDAPAPAPRLPKG------------------AAWTT 204
Fly 205 SFDERYTSSAVEATLGSKVECVYSLLSMLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQ 269
Fly 270 MMHAPDND----------QEVRKCAGQALHNVVHSHPDEKAGRREAKVLRLLDQIVDYCSFLKTL 324
Fly 325 LQSGGEAIADDSDRHPL---------AAISSLMKVSFDEEHRHAMCEL----------------- 363
Fly 364 -GALHAIPNLVHLDHAVHGPKPEDQCCNSLRRYALMALTNLTFGDENNKALLCGQKQFMEALVAQ 427
Fly 428 LDSAPDDLLQVTASVLRNLSWRADSNMKAVLNEIGTVTALALAAMRNRSENTLKAILSALWNLSA 492
Fly 493 HCSTNKAEFCAVDGALAFLVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRQHNCL 557
Fly 558 AILLQQLKSESLTVVSNSCGTLWNLSARSAEDQKFLWDNGAVPMLRSLIHSKHAMISEGSSSALK 622
Fly 623 NLLNFRPAVQNHHQLDPIARSMGLKALPTLEARKAKALQQELGERHTAETCDNLD---------- 677
Fly 678 ----------------------------TG---------------------GKLDKERASS---- 689
Fly 690 ------------SSRRHPAPRLTR------------------SAMLTKSESRDSVYSAKSDC--- 721
Fly 722 ----------AYDH-------------------------------LIRSASASDAHRK---VKPK 742
Fly 743 ITDFDLEME-----------------------QDTEATEEQPIDYSVKYSE---NATKTSTYQ-- 779
Fly 780 ---------ETDL---------DQPTDFSLRYAENQIESDLDISGPAGGQKSTITP--------- 817
Fly 818 -----------------------------P---AETVPEKSEGQEILLILDDSVKCYQTE----D 846
Fly 847 TP--YVISNAASVTDLRVAAKADAEAEVKPEVREVTSKEGAPK---------------------- 887
Fly 888 ----KLPKLSQCGSGSYTPEKPINYCEEGTPGYFSRYDSLSSL----DESG------KANQAIVG 938
Fly 939 TDADIKPK---LEKQEEQESQPA--EQVLTKPPTQANSAL------------------------- 973
Fly 974 -----------ETPLMFSRRSSMDSLVHDPDVDVANCDDKSSVVSD-FSRLASGVISPSEIPDSP 1026
Fly 1027 TQSMPQS----------------------------------PRRNSVAGSGQNVDSPPVVIPASL 1057
Fly 1058 QPLRSVFEDDLSSFNVEHTPAQFSTATSLSNLSIVDDE---------KAPASVAEEDNEDELLLA 1113
Fly 1114 NCINMGMQRKPTEAVKSTVVNSEVDVAEETIRSYCTEDTPALLSKVPSNTNLSVISMSSTDPKDA 1178
Fly 1179 TAGQAQMYAHQLSDDVSSNASDCGGASGHLLQQCIRDGM-------KKPLGEATS---DPIAMLR 1233
Fly 1234 RGGNELPGY--LPSADEMNK---------------FLVEDSPCNFSVVSGLSNLTVGSSLVGPAV 1281
Fly 1282 QLKETEPSSAD-QNPEMKAKPGKQEQVRRPPHWQDDSLSSLSIDSEDDTNLLSQAIAAGCNRPKS 1345
Fly 1346 NLGFSSNGKRSSSLSSSQPIAINAATSASSLNSAMTVRKSQQQESYSSVDSSDSNDNQ--SKSLF 1408
Fly 1409 ELCILKGMYKTKEPGARAQQMQEQPI-------------VGSSSVQSNPSLKQF-DSLPVQLPSS 1459
Fly 1460 GQVKRQRHHHHHHHHRERER-----ERKD--EKLLQECINTGISKKINAVPKNVLATSAAALEPC 1517
Fly 1518 HPMAATTSASALSTAAPDVEQKAHATSNPQQQSSTHPSSHILPNPIDAIATVTDTVRSPAAPNQG 1582
Fly 1583 NGNASQNGLETATGSKDLDSEDRSSDESNQSFIMETMVRLDSALNETCISGASEKHKDPDLMLKS 1647
Fly 1648 VERLTMEFVTSAEQLRSSSHNHSSSNSHKNNSSNNTWNESTCPNDVSFPSVSQTAP--------- 1703
Fly 1704 -----------------VLASLSLDEDATEARSLHELIEITPTNEQQPESLEGETDTLVNGHADS 1751
Fly 1752 YSGSSGGLNFQLGGQVQNAGVRLEPQRLLFNGTSASIMTNSTMIAFEARALAENLLQPAATDDDT 1816
Fly 1817 TEMTFSLNSLDLDNIRPPSGMESLNSCYQD----------HSQPSSLRQAMPSKSPRFARKMFPA 1871
Fly 1872 NLVARRALGHLAGSAESVNSSCNL--------------LDNIKPPSLMDELLDSMISVDSIQSE- 1921
Fly 1922 --VADGEQDCSMATTISV-SNYETAACDDQTMTVLQSCFDE-DEDATM-------NDYSSAESTP 1975
Fly 1976 KHG---STPSPNRRSLTPKDKRRLTKDRFKTYTIATSCEMEAPEANETLQIEIVEAAVPVATPSP 2037
Fly 2038 RANGRRRGSAERYKTQLIECPLALIQPQPDDCPSEQLSSIRAMMQQFTFITDINIGHSQE-TCES 2101
Fly 2102 TDHPEDAGESPECDQNSETESCDGQEPDQLPPPPSIVDLRTSVVKPT-------TLEPATAVKLV 2159
Fly 2160 RGRKKPAYVSPYSMQSQRN---------------------------SNNAAPSKKKTLSPTIAKR 2197
Fly 2198 SLVPGGSGVRLPAKKKPTPPPEPAPARLERQGTFVK--------------------------DEP 2236
Fly 2237 TNSNVQVPVVE-TKPAQTSPTHRA------SKLPTKKGTA---SGGSPSK--------AGSPKRI 2283
Fly 2284 PLAPA---------------RRMTPQRANTSLRLAAGKSHAASRVVS-----------------G 2316
Fly 2317 RV----------SSTTPPSRSNSNLNGSSAAAAAAAK-----INHAQSRIANIWKRVDEAKTKQS 2366
Fly 2367 SSNLRTQKTKSSN------MLNANG------TKPTLLRSSTFDNTPSTAGGVKSKL 2410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apc | NP_001263046.1 | ARM | 222..316 | CDD:237987 | 51/103 (50%) |
armadillo repeat | 258..332 | CDD:293788 | 35/83 (42%) | ||
ARM | 332..448 | CDD:237987 | 68/142 (48%) | ||
armadillo repeat | 369..403 | CDD:293788 | 15/33 (45%) | ||
armadillo repeat | 411..448 | CDD:293788 | 24/36 (67%) | ||
armadillo repeat | 498..539 | CDD:293788 | 28/40 (70%) | ||
ARM | 506..624 | CDD:237987 | 79/117 (68%) | ||
armadillo repeat | 548..582 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 590..624 | CDD:293788 | 21/33 (64%) | ||
APC_crr | 837..860 | CDD:283553 | 9/28 (32%) | ||
APC_crr | 903..927 | CDD:283553 | 14/27 (52%) | ||
APC_crr | 1066..1090 | CDD:283553 | 11/23 (48%) | ||
APC_crr | 1247..1271 | CDD:283553 | 8/38 (21%) | ||
Apc | XP_006254568.1 | Suppressor_APC | 135..215 | CDD:288297 | 9/54 (17%) |
ATP-synt_B | <200..283 | CDD:304375 | 26/105 (25%) | ||
ARM | 319..421 | CDD:237987 | 49/120 (41%) | ||
ARM | 495..623 | CDD:237987 | 82/127 (65%) | ||
armadillo repeat | 498..534 | CDD:293788 | 22/35 (63%) | ||
armadillo repeat | 542..579 | CDD:293788 | 29/36 (81%) | ||
armadillo repeat | 589..621 | CDD:293788 | 22/31 (71%) | ||
armadillo repeat | 629..670 | CDD:293788 | 28/40 (70%) | ||
ARM | 637..757 | CDD:237987 | 63/194 (32%) | ||
armadillo repeat | 679..713 | CDD:293788 | 12/33 (36%) | ||
armadillo repeat | 721..757 | CDD:293788 | 17/110 (15%) | ||
Arm_APC_u3 | 758..1045 | CDD:293235 | 96/521 (18%) | ||
APC_u5 | 1062..1161 | CDD:293236 | 39/142 (27%) | ||
APC_crr | 1282..>1299 | CDD:283553 | 5/19 (26%) | ||
APC_u9 | 1308..1393 | CDD:293239 | 22/100 (22%) | ||
APC_crr | 1663..1687 | CDD:283553 | 5/23 (22%) | ||
APC_u13 | 1688..1744 | CDD:293240 | 8/55 (15%) | ||
SAMP | 1745..1764 | CDD:283554 | 6/18 (33%) | ||
APC_u14 | 1765..1865 | CDD:293241 | 17/125 (14%) | ||
APC_u15 | 1902..1973 | CDD:293242 | 16/94 (17%) | ||
SAMP | 2061..2080 | CDD:283554 | 0/18 (0%) | ||
APC_basic | 2251..2596 | CDD:283581 | 64/325 (20%) | ||
EB1_binding | 2698..2870 | CDD:283565 |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341032 | |
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I8062 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2122 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 612 | 1.000 | Inparanoid score | I875 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002986 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9133 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105450 | |
Panther | 1 | 1.100 | - | - | O | PTHR12607 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2812 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.840 |