DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apc and ARMC3

DIOPT Version :9

Sequence 1:NP_001263046.1 Gene:Apc / 44642 FlyBaseID:FBgn0015589 Length:2417 Species:Drosophila melanogaster
Sequence 2:NP_775104.2 Gene:ARMC3 / 219681 HGNCID:30964 Length:872 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApcNP_001263046.1 ARM 222..316 CDD:237987
armadillo repeat 258..332 CDD:293788
ARM 332..448 CDD:237987
armadillo repeat 369..403 CDD:293788
armadillo repeat 411..448 CDD:293788
armadillo repeat 498..539 CDD:293788
ARM 506..624 CDD:237987
armadillo repeat 548..582 CDD:293788
armadillo repeat 590..624 CDD:293788
APC_crr 837..860 CDD:283553
APC_crr 903..927 CDD:283553
APC_crr 1066..1090 CDD:283553
APC_crr 1247..1271 CDD:283553
ARMC3NP_775104.2 ARM 1 15..54
armadillo repeat 21..52 CDD:293788
HEAT_2 32..108 CDD:290374
ARM 2 57..96
armadillo repeat 60..96 CDD:293788
ARM 63..179 CDD:237987
ARM 3 98..138
HEAT repeat 106..137 CDD:293787
ARM 4 140..179
armadillo repeat 143..177 CDD:293788
ARM 145..259 CDD:237987
HEAT_2 152..258 CDD:290374
ARM 5 181..220
armadillo repeat 184..220 CDD:293788
ARM 6 222..262
armadillo repeat 225..259 CDD:293788
ARM 7 264..304
ARM 8 306..345
ARM 321..426 CDD:237987
ARM 9 346..385
armadillo repeat 358..383 CDD:293788
ARM 10 388..427
armadillo repeat 391..436 CDD:293788
ARM 11 429..468
ARM 435..529 CDD:237987
armadillo repeat 435..465 CDD:293788
ARM 12 470..509
armadillo repeat 473..503 CDD:293788
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..693
EDR1 <720..858 CDD:291079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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