DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apc and CTNND1

DIOPT Version :9

Sequence 1:NP_001263046.1 Gene:Apc / 44642 FlyBaseID:FBgn0015589 Length:2417 Species:Drosophila melanogaster
Sequence 2:NP_001078927.1 Gene:CTNND1 / 1500 HGNCID:2515 Length:968 Species:Homo sapiens


Alignment Length:1037 Identity:206/1037 - (19%)
Similarity:339/1037 - (32%) Gaps:336/1037 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEPTLTPDLEEG--IAELSLE-----DVDVDSVPERKPHFLDYDAVPPPDYEEGFGASSGEQLK 58
            |...|||...:.|  :.:..||     |:.::. |:...|.| |..:|                 
Human    55 MANGTLTRRHQNGRFVGDADLERQKFSDLKLNG-PQDHSHLL-YSTIP----------------- 100

  Fly    59 MDKKYERDGEVSDYELAASGYTKKE----------FTQDDNTLHFTQSAVGLGSGAVGKKPAAKH 113
               :.:..|::      ...||:::          .|.||.|...|::.|......|..:.....
Human   101 ---RMQEPGQI------VETYTEEDPEGAMSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQPV 156

  Fly   114 FLDENPIPPD-------YMLAQELREMREHRSLDRNFERQSAQQQQLDELPPRNGG-----GSPA 166
            .:..:.:|.|       |:           ::|.|:|.:..            |||     |...
Human   157 AMGPDGLPVDASSVSNNYI-----------QTLGRDFRKNG------------NGGPGPYVGQAG 198

  Fly   167 SAGRPSRSKEPSYTLSRFLDGDAPAPAPRLPKGAAWTTSFDERYTSSAVEATLGSKVECVYSLLS 231
            :|..|.....|....||..:...|..:... ...:..|..:|||..| :|.......:.||.   
Human   199 TATLPRNFHYPPDGYSRHYEDGYPGGSDNY-GSLSRVTRIEERYRPS-MEGYRAPSRQDVYG--- 258

  Fly   232 MLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQ----MMHAPDNDQEVRKCAGQALHNVV 292
                      .:..:.:.|   |...|.|....|..::    .|...|.|..:....|.|.....
Human   259 ----------PQPQVRVGG---SSVDLHRFHPEPYGLEDDQRSMGYDDLDYGMMSDYGTARRTGT 310

  Fly   293 HSHPDEKAGRREAKVLRLLDQIVDYCSFLKTLLQSGGEAIADDS---------DRHPLAAISSLM 348
            .|.|     ||.   ||..:.::             ||.:..|.         :|..||::.||.
Human   311 PSDP-----RRR---LRSYEDMI-------------GEEVPSDQYYWAPLAQHERGSLASLDSLR 354

  Fly   349 K---------------------VSFDEEHRHA------MC--------ELGALHAIPNLVH-LDH 377
            |                     ...|....:|      :|        ::..|..||.||. |||
Human   355 KGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH 419

  Fly   378 AVHGPKPEDQCCNSLRRYALMALTNLTFG-DENNKALL--CGQKQFMEALVAQLDSAPD-DLLQV 438
                ||.|      :...|..||.|::|| |::||..:  |   ..:.|||..|..|.| ||.:|
Human   420 ----PKKE------VHLGACGALKNISFGRDQDNKIAIKNC---DGVPALVRLLRKARDMDLTEV 471

  Fly   439 TASVLRNLSWRADSNMKAVLNEIGTVTALALAAMRN--------------RSENTLKAILSALWN 489
            ....|.|||......|:.|.:.:..:|...:.....              ..|:.|......|.|
Human   472 ITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRN 536

  Fly   490 LSAHCSTNKAEFCAVDGALAFLVGMLSYEGPSK--TLKIIENAGGILRNVS-------------- 538
            :|:..|..:.:....||.:..|:.::..|...|  ..|::||...:|||:|              
Human   537 VSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQ 601

  Fly   539 -----------SHIAVC--------------------------------EPYR--QILRQHNCLA 558
                       .|.|.|                                .|.|  ::|.|...:.
Human   602 EAAPNVANNTGPHAASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVR 666

  Fly   559 ILLQQLK-SESLTVVSNSCGTLWNLSA---------RSAEDQKFLWDNGAVPMLRSLIHSKHAMI 613
            |.:..|| |::..::..|.|.:.||.|         |||     |....|:..:..|:.::|..:
Human   667 IYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSA-----LRQEKALSAIADLLTNEHERV 726

  Fly   614 SEGSSSALKNLLNFRPAVQNHHQLDPIARSMGLKALPTLEARKAKALQQELGERHTAETCDN-LD 677
            .:.:|.||:||     ||...::     ..:|..|:|.| .:.....||......:.:|..: |:
Human   727 VKAASGALRNL-----AVDARNK-----ELIGKHAIPNL-VKNLPGGQQNSSWNFSEDTVISILN 780

  Fly   678 TGGKLDKERASSSSRRHPAPRLTRSAMLTKSESRD--SVYSA----------------------- 717
            |..::..|...::.:......:.:..::.||.:|.  .|.:|                       
Human   781 TINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWK 845

  Fly   718 KSDCAYDHLIRSASASDAHRKVKPKITDFDLEMEQDTEATEEQPIDYSVKYSENATKTSTYQETD 782
            |||  :...:.:||.|.:..    ...|..|.:....:.::::|....::.|...:.|.:     
Human   846 KSD--FQVNLNNASRSQSSH----SYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKS----- 899

  Fly   783 LDQPTDFSLRYAENQIESDLDISGPAGGQKSTITPPAETVP-EKSEGQEIL------LILDD 837
            ||  .::|...........||.||..|..:    |...|.| .:.||||.|      |:|||
Human   900 LD--NNYSTPNERGDHNRTLDRSGDLGDME----PLKGTTPLMQDEGQESLEEELDVLVLDD 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApcNP_001263046.1 ARM 222..316 CDD:237987 18/97 (19%)
armadillo repeat 258..332 CDD:293788 16/77 (21%)
ARM 332..448 CDD:237987 43/164 (26%)
armadillo repeat 369..403 CDD:293788 13/34 (38%)
armadillo repeat 411..448 CDD:293788 14/39 (36%)
armadillo repeat 498..539 CDD:293788 12/67 (18%)
ARM 506..624 CDD:237987 37/188 (20%)
armadillo repeat 548..582 CDD:293788 9/36 (25%)
armadillo repeat 590..624 CDD:293788 7/33 (21%)
APC_crr 837..860 CDD:283553 1/1 (100%)
APC_crr 903..927 CDD:283553
APC_crr 1066..1090 CDD:283553
APC_crr 1247..1271 CDD:283553
CTNND1NP_001078927.1 Necessary and sufficient for interaction with CCDC85B. /evidence=ECO:0000269|PubMed:25009281 1..357 72/391 (18%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:P30999 299..306 1/6 (17%)
ARM 1 358..395 2/36 (6%)
ARM 363..481 CDD:237987 36/130 (28%)
armadillo repeat 368..393 CDD:293788 2/24 (8%)
ARM 2 398..437 15/48 (31%)
armadillo repeat 401..437 CDD:293788 15/45 (33%)
ARM 3 441..475 12/36 (33%)
armadillo repeat 444..479 CDD:293788 12/37 (32%)
ARM 4 476..516 7/39 (18%)
armadillo repeat 486..537 CDD:293788 6/50 (12%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:P30999 521..528 1/6 (17%)
ARM 524..>588 CDD:237987 17/63 (27%)
ARM 5 534..573 9/38 (24%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:P30999 568..575 1/6 (17%)
ARM 6 583..624 7/40 (18%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:P30999 622..629 0/6 (0%)
ARM 7 653..693 11/39 (28%)
armadillo repeat 656..693 CDD:293788 10/36 (28%)
ARM 657..759 CDD:237987 29/117 (25%)
ARM 8 700..739 12/48 (25%)
armadillo repeat 703..737 CDD:293788 10/38 (26%)
ARM 9 740..780 7/45 (16%)
armadillo repeat 744..787 CDD:293788 9/48 (19%)
ARM 10 781..826 7/44 (16%)
armadillo repeat 793..829 CDD:293788 5/35 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..944 23/103 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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