DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Apc and CTNNB1

DIOPT Version :9

Sequence 1:NP_001263046.1 Gene:Apc / 44642 FlyBaseID:FBgn0015589 Length:2417 Species:Drosophila melanogaster
Sequence 2:NP_001091679.1 Gene:CTNNB1 / 1499 HGNCID:2514 Length:781 Species:Homo sapiens


Alignment Length:895 Identity:168/895 - (18%)
Similarity:307/895 - (34%) Gaps:246/895 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ASSGEQLKMDKKYERDGEVSDYELAASGYTKKEFTQDDNTLHFTQSAVGLGSGAVGKKPAAKHFL 115
            |:..:.:::|...|     .|.:.|.|.:.::.:...           |:.|||....|:...  
Human     2 ATQADLMELDMAME-----PDRKAAVSHWQQQSYLDS-----------GIHSGATTTAPSLSG-- 48

  Fly   116 DENPIPPDYMLAQELREMREHRSLDRNFERQSAQQQQLDELPPRNGGGSPASAGRPSRSKEPSYT 180
            ..||...|...:|.|.|..:..|       ||..|:|:.::   :|..:...|.|...:..|   
Human    49 KGNPEEEDVDTSQVLYEWEQGFS-------QSFTQEQVADI---DGQYAMTRAQRVRAAMFP--- 100

  Fly   181 LSRFLDGDAPAPAPRLPKGAAWTTSFDERYTSSAVEATLGSKVECVYSLLSMLGSNDPLEMAKKF 245
              ..||.....|          :|.||..:.::.......|:: ..:::::::...|..|:|.:.
Human   101 --ETLDEGMQIP----------STQFDAAHPTNVQRLAEPSQM-LKHAVVNLINYQDDAELATRA 152

  Fly   246 L-----------------------ELSGNAQSCATLRRSGCMPLLVQMMHAPDNDQEVRKCAGQA 287
            :                       :||....|...:.||..|...:.......||.|..:|....
Human   153 IPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGT 217

  Fly   288 LHNVVHSHPDEKAGRREAKVLRLLDQIVDYCSFLKTLLQSGGEAIADDSDRHPLAAISSLMKVSF 352
            |||:.|        .||.               |..:.:|||              |.:|:|:  
Human   218 LHNLSH--------HREG---------------LLAIFKSGG--------------IPALVKM-- 243

  Fly   353 DEEHRHAMCELGALHAIPNLVHLDHAVHGPKPEDQCCNSLRRYALMALTNLTFGDENNK--ALLC 415
                      ||:                  |.|    |:..||:..|.||....|..|  ..|.
Human   244 ----------LGS------------------PVD----SVLFYAITTLHNLLLHQEGAKMAVRLA 276

  Fly   416 GQKQFMEALVAQLDSAPDDLLQVTASVLRNLSWRADSNMKAVLNEIGTVTALALAAMRNRSENTL 480
            |.   ::.:||.|:......|.:|...|:.|:: .:...|.::...|...|| :..||..:...|
Human   277 GG---LQKMVALLNKTNVKFLAITTDCLQILAY-GNQESKLIILASGGPQAL-VNIMRTYTYEKL 336

  Fly   481 KAILSALWNLSAHCSTNKAEFCAVDGALAFLVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCE 545
            ....|.:..:.:.||:||.......|..|  :| |....||:  ::::|....|||:|......|
Human   337 LWTTSRVLKVLSVCSSNKPAIVEAGGMQA--LG-LHLTDPSQ--RLVQNCLWTLRNLSDAATKQE 396

  Fly   546 PYRQILRQHNCLAILLQQLKSESLTVVSNSCGTLWNLSARSAEDQKFLWDNGAV-PMLRSLIHS- 608
                  .....|..|:|.|.|:.:.||:.:.|.|.||:..:.:::..:...|.: .::|:::.: 
Human   397 ------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 455

  Fly   609 KHAMISEGSSSALKNLLN-------FRPAVQNHHQLDPIAR-------------SMGL------- 646
            ....|:|.:..||::|.:       .:.||:.|:.|..:.:             ::||       
Human   456 DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC 520

  Fly   647 ----------KALPTLEARKAKALQQELGERHTAETCDNLDTGGKLDKERASSSSRRHPAPRLTR 701
                      .|:|.|.....:|.|..........|......|.::::.....:...|...|...
Human   521 PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVH 585

  Fly   702 SAMLTKSESR-----DSVYSAKSD---------CAYDHLIRSASASDAHRKVKPKITDFDLEMEQ 752
            :.::.:..:.     ..:||...:         |.......:|.|.:|.....| :|:. |....
Human   586 NRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAP-LTEL-LHSRN 648

  Fly   753 DTEAT----------EEQPIDYSVKYSENATKT------STYQET-DL---------------DQ 785
            :..||          |::|.||..:.|...|.:      ..:.|| ||               |.
Human   649 EGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADLGLDIGAQGEPLGYRQDD 713

  Fly   786 PTDFSLR---YAENQIESDLDISGPAGGQKSTITPPAETVPEKSEGQEIL 832
            |:..|..   |.::.:..|..:....||.......|.:.:|:....|:::
Human   714 PSYRSFHSGGYGQDALGMDPMMEHEMGGHHPGADYPVDGLPDLGHAQDLM 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApcNP_001263046.1 ARM 222..316 CDD:237987 19/116 (16%)
armadillo repeat 258..332 CDD:293788 17/73 (23%)
ARM 332..448 CDD:237987 24/117 (21%)
armadillo repeat 369..403 CDD:293788 6/33 (18%)
armadillo repeat 411..448 CDD:293788 10/38 (26%)
armadillo repeat 498..539 CDD:293788 11/40 (28%)
ARM 506..624 CDD:237987 29/119 (24%)
armadillo repeat 548..582 CDD:293788 9/33 (27%)
armadillo repeat 590..624 CDD:293788 6/35 (17%)
APC_crr 837..860 CDD:283553
APC_crr 903..927 CDD:283553
APC_crr 1066..1090 CDD:283553
APC_crr 1247..1271 CDD:283553
CTNNB1NP_001091679.1 Interaction with VCL. /evidence=ECO:0000250 2..23 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..57 7/24 (29%)
SRP1 142..>431 CDD:227396 82/375 (22%)
ARM 1 151..191 3/39 (8%)
armadillo repeat 153..178 CDD:293788 0/24 (0%)
Interaction with BCL9. /evidence=ECO:0000269|PubMed:17052462 156..178 0/21 (0%)
armadillo repeat 188..221 CDD:293788 9/32 (28%)
ARM 2 193..234 12/63 (19%)
armadillo repeat 230..262 CDD:293788 14/79 (18%)
ARM 230..262 CDD:214547 14/79 (18%)
ARM 3 235..276 17/88 (19%)
armadillo repeat 270..306 CDD:293788 10/38 (26%)
ARM 4 277..318 9/44 (20%)
armadillo repeat 312..347 CDD:293788 8/35 (23%)
ARM 5 319..360 11/41 (27%)
ARM 350..390 CDD:214547 14/44 (32%)
armadillo repeat 354..389 CDD:293788 11/39 (28%)
ARM 6 361..389 10/32 (31%)
ARM 7 400..441 11/40 (28%)
armadillo repeat 402..427 CDD:293788 9/24 (38%)
Arm 431..473 CDD:395413 7/41 (17%)
armadillo repeat 435..473 CDD:293788 7/37 (19%)
ARM 8 442..484 7/41 (17%)
armadillo repeat 482..517 CDD:293788 6/34 (18%)
ARM 9 489..530 3/40 (8%)
armadillo repeat 524..582 CDD:293788 8/57 (14%)
ARM 10 531..571 7/39 (18%)
Arm 583..622 CDD:395413 3/38 (8%)
armadillo repeat 587..621 CDD:293788 3/33 (9%)
ARM 11 594..636 6/41 (15%)
armadillo repeat 629..662 CDD:293788 7/34 (21%)
ARM 12 637..666 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 705..781 10/59 (17%)
Interaction with SCRIB. /evidence=ECO:0000250 772..781
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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