Sequence 1: | NP_001263046.1 | Gene: | Apc / 44642 | FlyBaseID: | FBgn0015589 | Length: | 2417 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006525592.1 | Gene: | Apc / 11789 | MGIID: | 88039 | Length: | 2870 | Species: | Mus musculus |
Alignment Length: | 2943 | Identity: | 721/2943 - (24%) |
---|---|---|---|
Similarity: | 1056/2943 - (35%) | Gaps: | 1050/2943 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 115 LDENPIPPDYML------------AQELREMREH-----RSLDRNFERQSAQQQQL--DELPPRN 160
Fly 161 GGGSPAS-AGRPSRSKE--PSYTLSRFLDGDAPA------------PAPRLPK------GAAWTT 204
Fly 205 SFDERYTSSAVEATLGSKVECVYSLLSMLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQ 269
Fly 270 MMHAPDND----------QEVRKCAGQALHNVVHSHPDEKAGRREAKVLRLLDQIVDYCSFLKTL 324
Fly 325 LQSGGEAIADDSDRHPL---------AAISSLMKVSFDEEHRHAMCEL----------------- 363
Fly 364 -GALHAIPNLVHLDHAVHGPKPEDQCCNSLRRYALMALTNLTFGDENNKALLCGQKQFMEALVAQ 427
Fly 428 LDSAPDDLLQVTASVLRNLSWRADSNMKAVLNEIGTVTALALAAMRNRSENTLKAILSALWNLSA 492
Fly 493 HCSTNKAEFCAVDGALAFLVGMLSYEGPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRQHNCL 557
Fly 558 AILLQQLKSESLTVVSNSCGTLWNLSARSAEDQKFLWDNGAVPMLRSLIHSKHAMISEGSSSALK 622
Fly 623 NLLNFRPAVQNHHQLDPIARSMGLKALPTLEARKAKALQQELGERHTAETCDNLD---------- 677
Fly 678 ----------------------------TG---------------------GKLD---------- 683
Fly 684 -KERASSSSRRHP------------------APRLTR-----SAMLTKSESRDSVYSAKSDCAYD 724
Fly 725 --HLIRSASASDAHR---------------------------------------------KVKPK 742
Fly 743 ITDFDLEME-----------------------QDTEATEEQPIDYSVKYSEN------------- 771
Fly 772 ---------------------ATKTSTY------------------------------------- 778
Fly 779 ------------------QETDL--DQPTDFSLRYAENQ----------------------IESD 801
Fly 802 LDISGPAGGQKSTITPPAETVPEKSEGQEILLILDDSVK----CYQTEDTPYVISNAASVTDLRV 862
Fly 863 AAKADAEAEVKPEVREVTSKEGAPKKLPKLSQCGSGSYTPEKPINYCEEGTPGYFSRYDSLSSL- 926
Fly 927 ---DESGKANQAIVGTDADIKPKLEKQEEQESQPAEQVLTKPP---------------------- 966
Fly 967 TQANSAL--------------------------ETPLMFSRRSSMDSLVHDPDVDVANCDDKSSV 1005
Fly 1006 VSD-FSRLASGVISPSEIPDSPTQSMPQSPRRNSVAGSGQNVDS----PPVVIPAS--------- 1056
Fly 1057 ---------LQPLRSVFEDDLSSFNVEHTPAQFSTATSLSNLSIVDDE---------KAPASVAE 1103
Fly 1104 EDNEDELLLANCINMGMQRKPTEAVKSTVVNSEVDVAEETIRSYCTEDTPALLSKVPSNTNLSVI 1168
Fly 1169 SMSSTDPKDATAGQAQMYAHQLSDDVSSNASDCGGASGHLLQQCIRDGM-------KKPLGEATS 1226
Fly 1227 ---DPIAMLRRGGNELPGY-----------------LPSADEMNKFLVEDSPCNFSVVSGLSNLT 1271
Fly 1272 VGSSLVGPAVQLKETEPSSAD-QNPEMKAKPGKQEQVRRPPHWQDDSLSSLSIDSEDDTNLLSQA 1335
Fly 1336 IAAGCNRPKSNLGFSSNGKRSSSLSSSQPIAINAATSASSLNSAMTVRKSQQQESYSSVDSSDSN 1400
Fly 1401 DNQSKSLFELCILKGMYKTKEPGARAQQMQEQPIVGSSSVQSNPSLKQFDSLPVQLPSSGQVKRQ 1465
Fly 1466 RHHHHHHHHRERERERKDEKLLQECINTGISKKINAVPKNVLATSAAALEPCHPMAATTSASALS 1530
Fly 1531 TAAPDVEQK---AHATSNPQQQSSTHPSSHILPNPIDAIATVTDTVRSPAAPNQGNGNASQNGLE 1592
Fly 1593 TATGSKDLDSED---RSSDESNQSFIMETMVRLDSALNETCISGASEKHKDPDLMLKSVERLTME 1654
Fly 1655 FVTSAEQLRSSSHNHSSSNSHKNNSSNNTWNESTCPNDVSFPSVSQTAPVLASLSLDEDATEARS 1719
Fly 1720 LHELIEITPTNEQQPESLE--GETDTLVNGHADSYSGSSGGLNFQLGGQVQNAGVRLEPQRLLFN 1782
Fly 1783 G-TSASIMTNSTMIAFEARALAENLLQPAATDDDTTEMTFSLNSLDLDNIRPPSGMESLNSCYQD 1846
Fly 1847 HSQPSSLRQAMPSKSPRFARKMFPANLVARRALGHLAGSAESVNSSCNLLDNIKPPSLMDELLDS 1911
Fly 1912 MISVDSIQSEVADGEQDCSMATTISVSNYETAACDDQTMTVLQSCFDEDEDATMNDYSSAESTPK 1976
Fly 1977 HGS----TPSPNRRSLTPKDKRRLTKDRFKTYTIATSCEMEAPEANETLQIEIVEAAVPVATPSP 2037
Fly 2038 RANGRRRGSAERYKTQLI-------ECPLALIQPQPDDCPSEQLSSIRAMMQQFTFITDINIGHS 2095
Fly 2096 QETCESTDHP-----------------------EDAGE---SPECDQNSE--------------- 2119
Fly 2120 -TESCDGQEPDQLP-----------------PPPSIVDLRTSVVKPTTLEPATAVKLVRGRKKPA 2166
Fly 2167 YVSPYSMQSQRN---------------------------SNNAAPSKKKTLSPTIAKRSLVPGGS 2204
Fly 2205 GVRLPAKKKPTPPPEPAPARLERQGTFVK--------------------------DEPTNSNVQV 2243
Fly 2244 PVVE-TKPAQTSPTHRA------SKLPTKKGTA---SGGSPSK--------AGSPKRIPLAPA-- 2288
Fly 2289 -RRMTPQRANTSLRLAAGKSHAASRVVSGRVSSTTPPSRSNSNLNGSSAAAAAAAKINHAQSRIA 2352
Fly 2353 NIWKRVDEAKTKQSSSNLRTQKTKSSNMLNANGTKPTLLR-----SSTFD--------------- 2397
Fly 2398 ------NTPSTAGGVKSK 2409 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apc | NP_001263046.1 | ARM | 222..316 | CDD:237987 | 51/103 (50%) |
armadillo repeat | 258..332 | CDD:293788 | 35/83 (42%) | ||
ARM | 332..448 | CDD:237987 | 67/142 (47%) | ||
armadillo repeat | 369..403 | CDD:293788 | 14/33 (42%) | ||
armadillo repeat | 411..448 | CDD:293788 | 24/36 (67%) | ||
armadillo repeat | 498..539 | CDD:293788 | 28/40 (70%) | ||
ARM | 506..624 | CDD:237987 | 79/117 (68%) | ||
armadillo repeat | 548..582 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 590..624 | CDD:293788 | 21/33 (64%) | ||
APC_crr | 837..860 | CDD:283553 | 7/26 (27%) | ||
APC_crr | 903..927 | CDD:283553 | 14/27 (52%) | ||
APC_crr | 1066..1090 | CDD:283553 | 11/23 (48%) | ||
APC_crr | 1247..1271 | CDD:283553 | 9/23 (39%) | ||
Apc | XP_006525592.1 | Suppressor_APC | 135..215 | CDD:371516 | 9/54 (17%) |
ARM | 348..400 | CDD:214547 | 22/51 (43%) | ||
APC_rep | 401..474 | CDD:376216 | 41/99 (41%) | ||
armadillo repeat | 498..534 | CDD:293788 | 22/35 (63%) | ||
ARM | 538..579 | CDD:214547 | 31/40 (78%) | ||
armadillo repeat | 542..579 | CDD:293788 | 29/36 (81%) | ||
armadillo repeat | 589..621 | CDD:293788 | 22/31 (71%) | ||
armadillo repeat | 629..670 | CDD:293788 | 28/40 (70%) | ||
ARM | 675..715 | CDD:214547 | 15/39 (38%) | ||
armadillo repeat | 679..713 | CDD:293788 | 12/33 (36%) | ||
Arm | 717..755 | CDD:366143 | 21/107 (20%) | ||
armadillo repeat | 721..757 | CDD:293788 | 18/105 (17%) | ||
Arm_APC_u3 | 758..1045 | CDD:374686 | 89/530 (17%) | ||
APC_u5 | 1062..1161 | CDD:374687 | 43/130 (33%) | ||
APC_r | 1283..>1300 | CDD:368672 | 5/19 (26%) | ||
APC_u9 | 1309..1395 | CDD:374689 | 23/86 (27%) | ||
APC_r | 1663..1686 | CDD:368672 | 4/25 (16%) | ||
APC_u13 | 1688..1741 | CDD:374690 | 7/52 (13%) | ||
SAMP | 1742..1763 | CDD:368673 | 4/20 (20%) | ||
APC_u14 | 1772..1865 | CDD:374691 | 18/95 (19%) | ||
APC_u15 | 1899..1973 | CDD:374692 | 13/73 (18%) | ||
SAMP | 2060..2079 | CDD:368673 | 2/18 (11%) | ||
APC_basic | 2251..2596 | CDD:368684 | 59/294 (20%) | ||
EB1_binding | 2698..2870 | CDD:368678 |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167837312 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2122 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 548 | 1.000 | Inparanoid score | I1140 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002986 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8887 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105450 | |
Panther | 1 | 1.100 | - | - | O | PTHR12607 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2812 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.840 |