Sequence 1: | NP_001263046.1 | Gene: | Apc / 44642 | FlyBaseID: | FBgn0015589 | Length: | 2417 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002941166.2 | Gene: | apc2 / 100487473 | XenbaseID: | XB-GENE-995291 | Length: | 2325 | Species: | Xenopus tropicalis |
Alignment Length: | 2760 | Identity: | 664/2760 - (24%) |
---|---|---|---|
Similarity: | 1042/2760 - (37%) | Gaps: | 865/2760 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 LTPDLEEGIAELSLEDVDVDSVPERKPHF---LDYDAVPPPDYEEGFGASSGEQLKMDKKYERD- 66
Fly 67 -GEVSDYELAASG-----------YTKKEFTQDDNTLHFTQSAV----GLGSGAVGKKPAAKHF- 114
Fly 115 ----------LDENPIPPDYMLAQEL-REMRE------HRSLDRNFER-----QSAQ-------- 149
Fly 150 -QQQLDELPPRNGGGSPASAGRPSRSKEPSYTLSRFLDGDAPAPAPRLPKGAAWTTSFDERYTSS 213
Fly 214 AVEATLGSKVECVYSLLSMLGSNDPLEMAKKFLELSGNAQSCATLRRSGCMPLLVQMMHAPDND- 277
Fly 278 --------QEVRKCAGQALHNVVHSHPDEKAGRREAKVLRLLDQIVDY----CSFLKTLLQSGGE 330
Fly 331 AIADDSDRHPL-------AAISSLMKVSFDEEHRHAMCELGALHAIPNLVHLDHAVHGPKPEDQC 388
Fly 389 CNSLRRYALMALTNLTFGDENNKALLCGQKQFMEALVAQLDSAPDDLLQVTASVLRNLSWRADSN 453
Fly 454 MKAVLNEIGTVTALALAAMRNRSENTLKAILSALWNLSAHCSTNKAEFCAVDGALAFLVGMLSYE 518
Fly 519 GPSKTLKIIENAGGILRNVSSHIAVCEPYRQILRQHNCLAILLQQLKSESLTVVSNSCGTLWNLS 583
Fly 584 ARSAEDQKFLWDNGAVPMLRSLIHSKHAMISEGSSSALKNLLNFRPAVQNHHQLDPIARSMGLKA 648
Fly 649 LPTLEARKAKALQQELGERHTAETCDNLDTGGKLDKERASSSSRRHPAPRLTRSAMLTKSESRDS 713
Fly 714 VYSAKSDCAYDHLI--RSASASDAHRKVKPKITDFDLEMEQDTEATEEQPIDYSVKYSENATKTS 776
Fly 777 TYQETDLDQPTDFSLRYAENQIESDLDISGPAGGQKSTITPP------AETVPEK--SEGQEILL 833
Fly 834 ILDDSVKCYQTEDTPYVISNAASVTDLRVAAKADAEAEVKPEVREVTSKEGAPKKLPKLS----- 893
Fly 894 ----------------------QCGSGS----YTPEKPINYCEEGTPGYFSRYDSLSSLDESGKA 932
Fly 933 NQAIVGTDADIKPKLEKQEEQESQ-PAEQVLTKPPTQANSAL-ETPLMFSRRSSMDSLVHDPDVD 995
Fly 996 VANCDDKSSVVSDFSRLASGVISPSEIPDSP-TQSMPQSPRRNSVAGSGQNVDSPPVVIPAS-LQ 1058
Fly 1059 PLRS-------------VFE----------DDLSSFNVEHTPAQFSTATSLSNLS----IVDDEK 1096
Fly 1097 APASVAEEDNEDELLLANCINMGMQRKPTE--AVKSTVVNS-------------------EV--- 1137
Fly 1138 ---DVAEETIRSYCTEDTPALLSKVPSNTNLSVISMSSTDPKDATAGQAQMYAHQLSDDVS-SNA 1198
Fly 1199 SDCGG--------------ASGHLLQQCIR------DGMKKPLGEATSDPIAMLRRGGNELPGY- 1242
Fly 1243 ----LP-SADEMNKFLVEDSPCNFSVVSGLSNLTVGSSLVGPAVQLKETEPSSADQNPEMKAKPG 1302
Fly 1303 KQEQVRRPPHWQDDSLSSLSIDSEDDTNLLSQAIAAGCNRPKSNLGFSSNGKRSSSLSSSQPIAI 1367
Fly 1368 NAATSASSLNSAMTVRKSQQQESYSSVDSSDSNDNQSKSLFELCILKGMYKTKEPGARAQQMQEQ 1432
Fly 1433 PIVGSSSVQSNPSLKQFDSLPVQLPSSGQVKRQRHHHHHHHHRERERERKDEKLLQECINTGISK 1497
Fly 1498 KINAVPKNVLAT---SAAALEPCHPMAATTSASALSTAAPDVEQKAHATSNPQQQSSTH-PSSHI 1558
Fly 1559 LPNPIDAIATVTD-TVRSPAAPNQGNGNASQNGLETATGSKDLDSEDR-SSDESNQSFIMETMVR 1621
Fly 1622 LDSALNETCISGASEKHKDPDLMLKSVERLTMEFVTSAEQLRSSSHNHSSSNSHKNNSSNNTWNE 1686
Fly 1687 STCPNDVSFP-SVSQTAPVLASLSLDEDAT---EARSLHELIEITPTNEQQPESLEGETDTLVNG 1747
Fly 1748 HADSYSGSSGGLNFQLGGQVQNAGVRLEPQRLLFNGTSASIMTNSTMIAFEARALAENLLQPAAT 1812
Fly 1813 DDDTTEMTFSLNSLDLDNIRPPSGMESLNSCYQDHSQPSSLRQAMPSKSPRFARKMFPANLVARR 1877
Fly 1878 ALGHLAGSAES--VNSSCNLLDNIKPPSLMDELLDSMISVDSIQSEVADGEQDCSMATTISVSNY 1940
Fly 1941 ETAACDDQTMTVLQSCFDEDEDATMNDYSSAESTPKHGSTPSPNRRSLTPKDKRRLTKDRFKTYT 2005
Fly 2006 IATSCEME------APEANETLQIE------IVEAAVPV--------ATPSPRANGRRRGSAERY 2050
Fly 2051 KTQLIECP-LALIQPQPDDCPSEQLSSIRAMMQQFTFITDINIGHSQETCESTDHPEDAGES--- 2111
Fly 2112 --------------PECDQNSETESCDGQEPDQLPPPPSIVDLRTSVVKPTTLEPATAVKLV--- 2159
Fly 2160 RGRKKPAYVSPYSMQSQRNSNNAAPSKKKTL---SPTIAKRS----LVPGG----SGVRLPAKKK 2213
Fly 2214 PTP--PPEPAPARLE-------------------------------RQGTFVKDE---------- 2235
Fly 2236 ---------PTNSNVQVPVVETKPAQTSPTHRASKLPTKKGTASGGSP---SKAGSPKRIPLAPA 2288
Fly 2289 RRMTPQRANTSLRLAAGKSHAASRVVSGRVSSTTPPSRSNSNLNGSSAAAAAAAKINHAQSRIAN 2353
Fly 2354 IWKR------------------------VDEAKTKQSSSNLRTQ-----KTKSSNMLNANGTKPT 2389
Fly 2390 LLRSSTFD-NTPSTAGGV-----KSKLPVV 2413 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Apc | NP_001263046.1 | ARM | 222..316 | CDD:237987 | 43/102 (42%) |
armadillo repeat | 258..332 | CDD:293788 | 32/86 (37%) | ||
ARM | 332..448 | CDD:237987 | 55/122 (45%) | ||
armadillo repeat | 369..403 | CDD:293788 | 13/33 (39%) | ||
armadillo repeat | 411..448 | CDD:293788 | 18/36 (50%) | ||
armadillo repeat | 498..539 | CDD:293788 | 23/40 (58%) | ||
ARM | 506..624 | CDD:237987 | 77/117 (66%) | ||
armadillo repeat | 548..582 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 590..624 | CDD:293788 | 21/33 (64%) | ||
APC_crr | 837..860 | CDD:283553 | 3/22 (14%) | ||
APC_crr | 903..927 | CDD:283553 | 4/23 (17%) | ||
APC_crr | 1066..1090 | CDD:283553 | 10/23 (43%) | ||
APC_crr | 1247..1271 | CDD:283553 | 11/23 (48%) | ||
apc2 | XP_002941166.2 | APC_N_CC | 14..65 | CDD:374728 | 6/31 (19%) |
SMC_prok_B | <21..435 | CDD:274008 | 118/440 (27%) | ||
Suppressor_APC | 130..203 | CDD:371516 | 14/72 (19%) | ||
APC_rep | 348..420 | CDD:376216 | 24/76 (32%) | ||
armadillo repeat | 419..462 | CDD:293788 | 20/43 (47%) | ||
armadillo repeat | 470..507 | CDD:293788 | 18/36 (50%) | ||
armadillo repeat | 516..549 | CDD:293788 | 16/32 (50%) | ||
armadillo repeat | 557..598 | CDD:293788 | 23/40 (58%) | ||
ARM | 603..643 | CDD:214547 | 28/39 (72%) | ||
armadillo repeat | 607..641 | CDD:293788 | 25/33 (76%) | ||
armadillo repeat | 649..683 | CDD:293788 | 21/33 (64%) | ||
Arm | 650..683 | CDD:366143 | 20/32 (63%) | ||
Arm_APC_u3 | 686..960 | CDD:374686 | 75/370 (20%) | ||
APC_r | 1088..>1106 | CDD:368672 | 7/17 (41%) | ||
SAMP | 1384..1404 | CDD:368673 | 7/51 (14%) | ||
APC_r | 1454..1476 | CDD:368672 | 4/21 (19%) | ||
APC_basic | 1889..2157 | CDD:368684 | 64/285 (22%) | ||
EB1_binding | <2283..>2304 | CDD:368678 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 202 | 1.000 | Domainoid score | I2930 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 617 | 1.000 | Inparanoid score | I875 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002986 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9548 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12607 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2812 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.060 |