DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cutlet and chtf18

DIOPT Version :9

Sequence 1:NP_787969.1 Gene:cutlet / 44637 FlyBaseID:FBgn0015376 Length:993 Species:Drosophila melanogaster
Sequence 2:XP_002935905.3 Gene:chtf18 / 100380057 XenbaseID:XB-GENE-987602 Length:1002 Species:Xenopus tropicalis


Alignment Length:1089 Identity:365/1089 - (33%)
Similarity:534/1089 - (49%) Gaps:183/1089 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQYP--DENEEFELQYQDELELLEDLPDEFNAYDGPSTSK-----------QAAEKQKENRAPV 52
            ||:|.  ...::||.|:..|||:|.:..|:..:...|..|:           .|.::.|.|    
 Frog     1 MDEYDLYGVEDDFESQFASELEVLAEFEDDVPSRPAPQRSQLRSKLSFEEAISAGDRVKSN---- 61

  Fly    53 AALRDSTRLGNSTLGSPQLSQI-TFGASQLGGEEEAEGTSSGGQVNRRLFGTPKGPPVGRGCSTP 116
            |..:.::......|.....|:. ...||.|..||:        :.:...|    .|||     ||
 Frog    62 ADSKTTSERNGDALACVNTSKTKKRDASCLDFEED--------EFSDSFF----EPPV-----TP 109

  Fly   117 FQRMPAIQELENTQLTSRSYGLEKENAAANQLQEVGLKNVNKRRLERDLFGDIDDLFHESYEDPM 181
            ..:.|.|:.::.....|..|. ....|.::.:......:..:::.|||......|.|..|...|:
 Frog   110 KHKRPRIEAVKKLDFGSDEYA-GNSTALSDDITPPPSPHYTQKKSERDSKFPSCDAFEVSDMAPL 173

  Fly   182 VKKARTEEQRDHEAIERILELRRKMRESSKTLRKDDVSRLKALHDFKMRNLSYEIPNWPFLAIQR 246
            .......||:      |:|:                  |...|.|              ::.:..
 Frog   174 QVTPTESEQK------RVLK------------------RPPVLED--------------YINVTS 200

  Fly   247 SDLERIYVRFHSED----YEQRQLDLISARGE---VVGSLLGEAKDKIWQEAGEIVLSRATA--- 301
            :|..|:|:....::    .:|:|.::....|:   ::|......|:::..|....||..:..   
 Frog   201 TDGSRVYMTLKEDNDGSGTQQKQGNVKWNSGQQLHLLGVPFSYLKEQVNDERRRQVLEESQKLTE 265

  Fly   302 ----------AEDADVTLVN-SNANSEPGR-------LWVDKYKPRKYIDLLSDEMTNRSLLYWL 348
                      .||...||.| .||..|.|.       ||||.:.||.|.:||||:.|||.||.||
 Frog   266 MLNSQINDEFGEDDSETLENGDNAGEEDGENESSSHSLWVDCFTPRHYTELLSDDYTNRCLLKWL 330

  Fly   349 KMWDKVVFGKAFHSKREQEAVTGEGGTAGGAANQLNSFNKRTGKFESNGGWRQRKSRQALNTNVD 413
            |:||.|||||       :..|..........||..|. .::..||:|    :.:.:.:.|...:|
 Frog   331 KLWDTVVFGK-------ERVVKKPKANVDPRANFKNQ-KEQQSKFKS----KAQITEEILEAELD 383

  Fly   414 ALGRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMSSVLNE 478
            ...||..||||||||||||||||||.|||||||||.|:|||||||||.||..:|..|||.|||..
 Frog   384 QHNRPKNKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGV 448

  Fly   479 DKRPNCIVLDEIDGAPRQSIDYLVKFIS--DAVYTK-----VKAKGAKAEHNVLKRPIICICNDV 536
            |:||||:::|||||||..||:.|:..|:  ||..|:     ...|..|.|..:|.|||||||||.
 Frog   449 DERPNCLIIDEIDGAPAVSINMLLSLINRKDAKETEGGTDVTTGKKKKKEGGLLLRPIICICNDQ 513

  Fly   537 YDPALRPLRQVAFVVTFPPIDAARLAERLVKIAFKEQLKTDFGSLIALAEKSGNDVRSCISSMQF 601
            |.|:||.|||.||::.||....:||.:||.:|..|:.:|.|.|:|:||.||:.||:||||:::||
 Frog   514 YVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTENDIRSCINTLQF 578

  Fly   602 FNAQ-KHSLTLQDVLNNNLGQKDRHQGLFAVWDAIF---RIQRPR-------KTLHTDANKVDE- 654
            .:.: |..|.::.|....:|.||:::|||:||..||   :|||.|       |.||......:| 
 Frog   579 LHGRGKKELNMRSVQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEIAIKDLHLFLGSGNES 643

  Fly   655 -------PAQVTMTNTSVTTRVRNVLEVVHSSGDYERLTQGVYENYLQQKMPDPNFTGVCEALKW 712
                   |.      ::|..|..::|.:..|:|:||:||.|:|:|:|..|:.:.||:.||.||.|
 Frog   644 LGGVGKAPL------SAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNMKVKESNFSTVCLALDW 702

  Fly   713 FCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAWPKIAFPTRGFEFQQKSTNQRNIFQAL 777
            ..|||.|...|...||:.:..||.:..||:|||||....|:||:|...:|.|.|....:|:..|:
 Frog   703 LEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNVPRIAYPNSHYEAQSKLNQMQNLLNAM 767

  Fly   778 CKGVTTSALGVGQGGTLLLDTVPLLKRILSPQLRSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQ 842
            ...::.:........:|:||.:.||..::||:||.|..||.|.||:|.|...|..|:...||:.|
 Frog   768 VAEISPAIRTRVGPQSLVLDALCLLLDVISPKLRPVNTQLFSTKEKQQLAELINTMLAYNLTYHQ 832

  Fly   843 VKSQEGHYVFQTEPDLDALSAFPGYTGLSLP------YFSRQLIAREVDLERIRRA-----APKG 896
            .::.||.||::.:|:::.:..||     .||      |.::||||||::|||:||.     |...
 Frog   833 ERTMEGQYVYKLDPNVEDVCRFP-----DLPIRKPLTYQAKQLIAREIELERMRRTEAFQQARNA 892

  Fly   897 GA--PSAPAAK--KKTSGAAAQLP----NHLQTLKPKPISASNMHSAPKQQLTKDFFGR------ 947
            |.  .||.|||  .:|.||.:...    ||.|.|:.....|:.....|:    ||||||      
 Frog   893 GRDNASANAAKPTTETKGAKSTAKPAALNHEQRLENIMKKAAAFEEKPE----KDFFGRQIVKKV 953

  Fly   948 ---ITHKSTSTNSAEESKTDAIVKSPIWYRYKEGFNNAVRKDVHIHELL 993
               :...:....|.|.....|:..|.:|:|:.||.:||||::::|.:||
 Frog   954 AAPVAASANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDLL 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cutletNP_787969.1 AAA 424..555 CDD:99707 85/137 (62%)
chtf18XP_002935905.3 PRK04195 384..>614 CDD:235250 124/229 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5381
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32532
Inparanoid 1 1.050 480 1.000 Inparanoid score I1434
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D291910at33208
OrthoFinder 1 1.000 - - FOG0005061
OrthoInspector 1 1.000 - - oto105286
Panther 1 1.100 - - LDO PTHR23389
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3581
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.070

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