DRSC/TRiP Functional Genomics Resources

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Protein Alignment cutlet and rfc1

DIOPT Version :10

Sequence 1:NP_787969.1 Gene:cutlet / 44637 FlyBaseID:FBgn0015376 Length:993 Species:Drosophila melanogaster
Sequence 2:XP_073800067.1 Gene:rfc1 / 100037336 ZFINID:ZDB-GENE-070410-99 Length:1148 Species:Danio rerio


Alignment Length:1064 Identity:232/1064 - (21%)
Similarity:388/1064 - (36%) Gaps:291/1064 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DENEEFELQYQDE------LELLEDLPDEFNA-YDGPSTSKQAAE------KQKENRAP-VAALR 56
            ||::|.|.|..|:      |.:|:|.|....| .|..|.||.:::      |.|::.:| .:.::
Zfish   217 DEDKELEKQIHDDEEFARTLAMLDDAPLPKKARVDSISPSKSSSQAIASDIKPKKDLSPKTSPVK 281

  Fly    57 DSTRL-------------GNSTLG------SPQLSQITFGASQLGGEEEAEGTSSGGQVNRRLFG 102
            .|::|             |....|      ||:...|:..:|:.....:....|:|...:|.| .
Zfish   282 TSSKLAQMKRRQEERDEQGKKDKGEKQIKISPKKEPISPTSSERAATPKTASASAGMAKSRNL-S 345

  Fly   103 TPKGPPVGRGCSTPFQRMPAIQELENTQLTS---RSYGLEKENAAANQLQEVGLKNV---NKRRL 161
            |||...|....|.......:..:||..:..|   ||| |.:|...|     :|.|::   .:..|
Zfish   346 TPKSESVASKTSPTKPENTSPDDLEKKRANSSAYRSY-LNREGPRA-----LGSKDIPQGEENCL 404

  Fly   162 ERDLF---GDIDDLFHESYEDPMVKKARTEEQRDHEAIER-----ILELRRKM------RES--S 210
            |..:|   |.::.:               |.......|||     ...:.||.      |:|  |
Zfish   405 EGCVFVLTGVLESM---------------ERDEAKSLIERYGGKVTGNVSRKTTYLVLGRDSGVS 454

  Fly   211 KTLRKDDVSRLKALHDFKMRNLSYEIPNWPFLAIQRSDLERIYVRFHSEDYEQRQLDLISARGEV 275
            || .|.:....|.:::.::.:|....|.      ::|..| |.....::..:.|..|   :||:|
Zfish   455 KT-EKAESFGTKIINEDELLDLIRTKPG------KKSKYE-IAAEAENKSSKTRTPD---SRGKV 508

  Fly   276 VGSLL----------------GEAKDKIWQEAGEIVLSRATAAEDADVTL----------VNSNA 314
            ..|..                |::|.....::|    :|..:..:...:|          |:.:|
Zfish   509 ASSAKKATPQGPSPNKRSSSGGKSKPGSASKSG----ARGASCSEVKKSLSFDQTKTASPVSHSA 569

  Fly   315 NSEPGR--LWVDKYKPRKYIDLL---SDEMTNRSLLYWLKMWDKVVFGKAFHSKREQEAVTGEGG 374
            ....|.  ||||||:||...:|:   .|:.....||.||:.|.|      .||           |
Zfish   570 PENDGSSLLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQSWHK------HHS-----------G 617

  Fly   375 TAGGAANQLNSFNKRTGKFESNGGWRQRKSRQALNTNVDALGRPMQKVALLCGPPGLGKTTLAHT 439
            .|...|.:...|    |..:...|:                     |.|||.||||:||||.|..
Zfish   618 NAKAPAPKFGKF----GSKDDGSGF---------------------KAALLSGPPGVGKTTTAAL 657

  Fly   440 IARHAGYNVREINASDDRSPEAFKLALENGTQMSSVLN-------EDKRPNCIVLDEIDG----A 493
            :....||:..|:|||..||..:.|..:......:|:.|       .....:.:::||:||    .
Zfish   658 VCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNE 722

  Fly   494 PRQSIDYLVKFISDAVYTKVKAKGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDA 558
            .|..|..::..|..:                 |.||||:|||.....:|.|....:.:.|.....
Zfish   723 DRGGIQEMIGLIKQS-----------------KIPIICMCNDRNHQKIRSLANYCYDLRFQRPRV 770

  Fly   559 ARLAERLVKIAFKEQLKTDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTL-QDVLNNNLGQK 622
            .::...::.|||||.||....:|..:...|..|:|..:.::..::|:...:|. |...:.|..:|
Zfish   771 EQIKGAMMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKK 835

  Fly   623 DRHQGLFAVWDAIFRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHSSGDYERLTQ 687
            |...|.|.|...:|.:.             :|.|.:::.:.|..        ..|   ||.....
Zfish   836 DMKLGPFDVCRKVFALG-------------EETAHMSLIDKSDL--------FFH---DYSLAPL 876

  Fly   688 GVYENYLQQKMPDPNFTG---------VCEALKWFCFTDTVQHQISRQQNYSVYP---------- 733
            .|.||||..:   |...|         :.:.....|..|.|..||..:|.:|:.|          
Zfish   877 FVQENYLHVR---PAAAGGNLKSHLVLLSKTADSICDGDLVDRQIRSKQTWSLLPTQAIYASVLP 938

  Fly   734 -YLQYGFVAWHLLFATLAWPKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGGTLLLD 797
             .|..|:::        .:|.  ||:...:|.....:.| |.|.|...::...|...:  .:.||
Zfish   939 GELMRGYMS--------QFPN--FPSWLGKFSSSGKHSR-IIQELASHMSLKTLSSKE--AVNLD 990

  Fly   798 TVPLLKRILSPQLRSVAVQLLSPKEQQDLRHTIEVMVDLGL------TFVQVKSQEGHYVFQTEP 856
            .:        |.|||..::.|.....:....::::|.|..:      ..:::.:.:|    |.:|
Zfish   991 YL--------PYLRSAVLKPLQSLGSEGANQSVKLMDDYDIIKEDVDNMMEISTWDG----QPDP 1043

  Fly   857 ----DLDALSAFP-GYTGLS-LPYFSRQLIAR------------EVDLE-RIRRAAPKGGAPSAP 902
                |....:||. .|...| |..:|.|::.:            |:|.| :::......|..:..
Zfish  1044 YSKLDSKVKAAFTRAYNKESHLTPYSLQVVKKSRKGAVDPELLGELDNESQVQEEEEDDGLGADA 1108

  Fly   903 AAKKKTSGAAAQLPNHLQTLKPKP 926
            ..|:|.|..|.:........|.||
Zfish  1109 MIKQKKSKPAKETKPAKDVKKEKP 1132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cutletNP_787969.1 PRK04195 416..>645 CDD:235250 63/240 (26%)
rfc1XP_073800067.1 None

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