DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and CPD

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_196188.1 Gene:CPD / 830453 AraportID:AT5G05690 Length:472 Species:Arabidopsis thaliana


Alignment Length:542 Identity:125/542 - (23%)
Similarity:211/542 - (38%) Gaps:129/542 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AFLALPLFLVTYFELGLLRRKRMLNKFQGPSM--LPLVGNAHQM-GNTPTEILNRF-------FG 61
            |||.|...:...|.| ||||.|.......|..  |||:|...|: |...||....|       :|
plant     5 AFLLLLSSIAAGFLL-LLRRTRYRRMGLPPGSLGLPLIGETFQLIGAYKTENPEPFIDERVARYG 68

  Fly    62 ---WWHEYGKDNFRYWIGYYSNIMVTNPKYMEFILSSQTLISKSDVYDLTHP-----WLGL-GLL 117
               ..|.:|:          ..|...:|:...|:|.::     ..:::.::|     .||. .||
plant    69 SVFMTHLFGE----------PTIFSADPETNRFVLQNE-----GKLFECSYPASICNLLGKHSLL 118

  Fly   118 TSTGSKWHKHRKMITPAF-HFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDV 181
            ...|| .||....:|.:| :.:|::|                                 :|.||:
plant   119 LMKGS-LHKRMHSLTMSFANSSIIKD---------------------------------HLMLDI 149

  Fly   182 ICDTAMGVSINAMENRSSSVVQAFKDITY--TIK-MRAFSP--WK---RNKYLF----HFAPEYP 234
              |..:..::::..:|...:.:| |.||:  |:| :.:|.|  |.   |.:||.    .|:...|
plant   150 --DRLVRFNLDSWSSRVLLMEEA-KKITFELTVKQLMSFDPGEWSESLRKEYLLVIEGFFSLPLP 211

  Fly   235 EYSKTL-KTLQ------DFTNEIIAKRIEVRKSGLEVGIKADEFSRKKMAFLDTLLSSKVDGRPL 292
            .:|.|. |.:|      :....::.||.|..:.|.|          :|...|..||::. ||  .
plant   212 LFSTTYRKAIQARRKVAEALTVVVMKRREEEEEGAE----------RKKDMLAALLAAD-DG--F 263

  Fly   293 TSQELYEEVSTFMFEGHDTTTSGVGFAVYLLSRHP-------DEQEKLFNEQCDVMGASGLGRDA 350
            :.:|:.:.:...:..|::||::.:..||..|:..|       :|.||:...:.|       ....
plant   264 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSD-------SYSL 321

  Fly   351 TFQEISTMKHLDLFIKEAQRLYPSVPFIGRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKD 415
            .:.:..:|......:.|..|:...:..:.|....|..|.|..:|||..:......:..:...|||
plant   322 EWSDYKSMPFTQCVVNETLRVANIIGGVFRRAMTDVEIKGYKIPKGWKVFSSFRAVHLDPNHFKD 386

  Fly   416 PHKFQPERFDREK--PGPFE-YVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPA-LDELVS 476
            ...|.|.|:....  .||.. :.||..|||.|.|.:.|.:.:...:.:::..|..:|| .|:|| 
plant   387 ARTFNPWRWQSNSVTTGPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTGFSWVPAEQDKLV- 450

  Fly   477 KDGYISTTLGLQ--PAEKKSRD 496
               :..||...:  |...|.||
plant   451 ---FFPTTRTQKRYPIFVKRRD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 103/483 (21%)
CPDNP_196188.1 p450 1..472 CDD:386267 125/542 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.