DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:540 Identity:189/540 - (35%)
Similarity:285/540 - (52%) Gaps:50/540 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LCAFLALPLFLVTYFELGLL-------RRKRMLNKFQGPS-MLPLVGNAHQMGNTPTEILNRFFG 61
            |..::|..:.|:|...|.:|       |::|:|....||. ..||:|:|..:.|...:...:...
 Frog     9 LLVWVAAAVVLLTLLALSILPALQDYVRKRRILKPIPGPGPNYPLIGDALFLKNNGGDFFLQICE 73

  Fly    62 WWHEYG-KDNFRYWIGYYSNIMVTNPKYMEFILSSQTLISKSDVYDLTHPWLGLGLLTSTGSKWH 125
            :...|. :...:.|||....|:|.:...:|.:|||...:.|:.:|...|||||.|||||||.||.
 Frog    74 YTESYRLQPLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLGKGLLTSTGEKWR 138

  Fly   126 KHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDVICDTAMGVS 190
            ..||||||.|||.||.:|.|||||.|...:::|:...||.: ||...:.....||:|.:||||..
 Frog   139 SRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQTHVDGES-FDCFMDVTLCALDIISETAMGRK 202

  Fly   191 INAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHFAPEYPEYSKTLKTLQDFTNEIIAKRI 255
            |.|..||.|..|||...::..|:.|...||....:|:....:..|:.|.||.|..||::.|.:|.
 Frog   203 IQAQSNRDSEYVQAIYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKILHSFTDKAILERA 267

  Fly   256 -EVRKSGLEVGIKAD-----EFSRKKMAFLDTLLSSKVD-GRPLTSQELYEEVSTFMFEGHDTTT 313
             |::|.|.:.....|     :..:|:.||||.||.:..| |..::..::.|||.||||||||||.
 Frog   268 EELKKMGEQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTFMFEGHDTTA 332

  Fly   314 SGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQEISTMKHLDLFIKEAQRLYPSVPFI 378
            :.:.::::||..||:.|.::..|..:|.|.|  .|..|..::..:::|:..|||:.|:|||||..
 Frog   333 AALNWSLFLLGSHPEAQRQVHKELDEVFGKS--DRPVTMDDLKKLRYLEAVIKESLRIYPSVPLF 395

  Fly   379 GRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREKP---GPFEYVPFSAG 440
            ||...:|..|.|..||||..:.:....|..:...|.:|.:|:||||..|..   .|:.|:|||||
 Frog   396 GRTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAG 460

  Fly   441 PRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTLGLQPAEKKSRDAHNHKYDPI 505
            .||||||:|||:|.|.|:|.|:||:.|                            :|...:.:..
 Frog   461 LRNCIGQRFALMEEKVVLSSILRNYWV----------------------------EASQKREELC 497

  Fly   506 LSASMTLKSENGLHLRMKQR 525
            |...:.|:.::|:.:::|.|
 Frog   498 LLGELILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 174/446 (39%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 177/494 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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