DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001038763.1 Gene:cyp46a1.3 / 692332 ZFINID:ZDB-GENE-060519-40 Length:491 Species:Danio rerio


Alignment Length:507 Identity:128/507 - (25%)
Similarity:227/507 - (44%) Gaps:72/507 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WIVLCAFLALPLFLVTY--FELGLLRRKRMLNKFQGPSMLPLVGNAHQMGNTPTEILNR------ 58
            |::...|..|....|.:  :.|.:.:..:..:...||..     :...:|:.||  :||      
Zfish     5 WLLYMVFYLLSAVFVVFLAYCLYIHQVHQKYDHIPGPPR-----DNFLLGHIPT--INRVTKSER 62

  Fly    59 -----FFGWWHEYGK----DNFRYWIGYYSNIMVTNPKYMEFILSSQTLISKSDVYD-----LTH 109
                 ...|..:||.    ::|.|.|     |.|..|:..:.|:.|...:....:|.     ...
Zfish    63 HMNDLLLIWAEKYGPVYRLNSFHYVI-----INVHCPEATKTIMMSPKYLKDPFIYKRLFGLFGK 122

  Fly   110 PWLGLGLLTSTGSK-WHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEE 173
            .:||.||:|:|... |::.|:::.|||..:.|:......||.|.:.:|:|:::|.........:.
Zfish   123 RFLGYGLVTATDHDIWYRQRRIMDPAFSSSYLRGLISTFNEMSERLMDKLEEMAINKTPAVMHDL 187

  Fly   174 AHYLTLDVICDTAMGVSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHFAPEYPEYSK 238
            .:.:|||:||..|.||.:|..:...:...||.:.....:.:....|         |...:|   |
Zfish   188 VNCVTLDIICKVAFGVDLNLFKQTDNPFQQAIEQCLQGMVLDLRDP---------FCKFFP---K 240

  Fly   239 TLKTLQDFTNEIIAKR------IEVRKSGLEVG--IKADEFSRKKMAFLDTLLSSKVDGRPLTSQ 295
            ..|.:|:.....:..|      |:.||:.:|:|  :..|..::    .|.|....||:... ..:
Zfish   241 NWKAIQETKGATVLLRKTGEQWIQNRKTAVEIGEDVPNDILTQ----ILKTAKEEKVNNTK-DHE 300

  Fly   296 ELYEEVSTFMFEGHDTTTSGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQEISTMKH 360
            ::.:...||...|.:||.:.:.||:..|.|||:..::...|..:|:|..   ||.:::::....:
Zfish   301 QMLDNFVTFFIAGQETTANQLSFAIMELGRHPEIYKRAKAEVDEVLGTK---RDISYEDLGKFTY 362

  Fly   361 LDLFIKEAQRLYPSVPFIGRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFD 425
            |...:||..||||:.|...|:..:|.||:|..:|.|.::.....:....::.||||.||.||||:
Zfish   363 LSQVLKETLRLYPTAPGTNRWLHEDMVINGIKIPGGISVIFSSYVAQRLEKHFKDPLKFDPERFN 427

  Fly   426 REKPGPFE-YVPFSAGPRNCIGQKF--------ALLEIKTVVSKIIRNFEVL 468
            ...|.|:. |.|||.|||:|:||.|        ||.::.|.:..:..:|.::
Zfish   428 VNAPKPYYCYYPFSLGPRSCLGQVFSQATPAEGALAQLLTQLLTLCSHFLIV 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 123/473 (26%)
cyp46a1.3NP_001038763.1 p450 39..452 CDD:278495 118/444 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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