DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and cyp46a1.2

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_009292815.1 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:545 Identity:141/545 - (25%)
Similarity:254/545 - (46%) Gaps:86/545 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLCAFLALPLFLVTYFELGLLRRKRMLNKFQGPSMLP----LVGNA----HQMGNTPTEILNRFF 60
            |..||||..|:      :..|.:|  .:...||   |    |:|::    ..|.:..:.|.:.|.
Zfish    17 VFTAFLAYCLY------IHHLHQK--YDHIPGP---PRDNFLLGHSPSLTKAMYSDDSLIHDLFL 70

  Fly    61 GWWHEYGKDNFRYWIGYYSNIMVTNPKYMEFILSS----QTLISKSDVYDL-THPWLGLGLLTST 120
            .|..:|| ..:|....:|..|:|..|:..:.||.|    :...|.|.:::| ...:||.||:|:.
Zfish    71 QWAEKYG-PVYRINTLHYIAILVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNGLVTAV 134

  Fly   121 GSK-WHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDVICD 184
            ... |::.|:::.|||..:.|:......:|.|.:.:|:|:::|:........:..:.:||||||.
Zfish   135 DHDIWYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDVICK 199

  Fly   185 TAMGVSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHFAPEYPEYSKTLKTLQDFTNE 249
            .|.||.:|.:..:.|....|.:.....:.:.|..|      ||...|      |..|.:|...:.
Zfish   200 VAFGVDLNFLTQKDSPFQNAIELCLNGMALDARDP------LFRIFP------KNWKLIQQIRDA 252

  Fly   250 IIAKR------IEVRKSGLEVG--IKADEFSR-KKMAFLDTLLSSKVDGRPLTSQELYEEVSTFM 305
            .:..|      |:.||:.::.|  :..|..:: .|:|..:.:.||:      ..:::.:...||.
Zfish   253 AVLLRKTGEKWIQNRKTAVKNGEDVPKDILTQILKIAEEENVNSSE------DLEQMMDNFVTFF 311

  Fly   306 FEGHDTTTSGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQEISTMKHLDLFIKEAQR 370
            ..|.:||.:.:.||:..|.|:|:..::...|..:|:|..   |:.:.:::..:.:|...:||..|
Zfish   312 IAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLGTK---REISNEDLGKLTYLSQVLKETLR 373

  Fly   371 LYPSVPFIGRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREKPGPFE-Y 434
            |||:.|...|:..:|.:|:|..:|.|.::.....:....::.||||.||.|||||...|.|:. |
Zfish   374 LYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERFDENAPKPYYCY 438

  Fly   435 VPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTLGLQPAEKKSRDAHN 499
            .||:.|||.|:||.|:.:|.|.|::|:::.||                  ..|.|.:        
Zfish   439 YPFALGPRTCLGQVFSQMEAKVVLAKLLQRFE------------------FSLVPGQ-------- 477

  Fly   500 HKYDPILSASMTLKSENGLHLRMKQ 524
             .:|  :..:.||:.::|:...:||
Zfish   478 -SFD--IKDTGTLRPKSGVICNIKQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 125/458 (27%)
cyp46a1.2XP_009292815.1 p450 39..495 CDD:278495 131/509 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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