DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and Cyp4f4

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_775146.1 Gene:Cyp4f4 / 286904 RGDID:708363 Length:522 Species:Rattus norvegicus


Alignment Length:538 Identity:155/538 - (28%)
Similarity:252/538 - (46%) Gaps:65/538 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WIVLCAFLALPLFLVTYFELGLLRRKRMLNKFQGPSMLPLVGNAHQMGNTPTE----ILNRFFGW 62
            |:::.......:|..||..|....:....|.|.|          |....||||    .:.:....
  Rat    29 WLLVRVLTQTYIFYRTYQHLCDFPQPPKWNWFLG----------HLGMITPTEQGLKQVTKLVAT 83

  Fly    63 WHEYGKDNFRYWIG-YYSNIMVTNPKYMEFILSSQTLISKSDV--YDLTHPWLGLGLLTSTGSKW 124
            :.:    .|..|:| ....|.:.:|..:..:||:...::..:|  |....||||.|||.|.|.||
  Rat    84 YPQ----GFMTWLGPILPIITLCHPDVIRSVLSASASVALKEVIFYSFLKPWLGDGLLLSDGDKW 144

  Fly   125 HKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNI-FDFQEEAHYLTLDVICDTAMG 188
            ..||:|:|||||||||:.:.::.|:::.....:.:.:|.||:. .|..:....:|||.:......
  Rat   145 SCHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQDLASGGSARLDMFKNISLMTLDSLQKCVFS 209

  Fly   189 VSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHFAPEYPEYSKTLKTLQDFTNEIIAK 253
            ...|..| :.|..:.|..:::..:..|..........|:........:.|..|.:.:||:.:|..
  Rat   210 FDSNCQE-KPSEYISAILELSALVAKRYQQLLLHTDSLYQLTHNGRRFHKACKLVHNFTDAVIQG 273

  Fly   254 RIEVRKSGLEVGIKADEFSRKKMAFLDTLLSSK-VDGRPLTSQELYEEVSTFMFEGHDTTTSGVG 317
            |.....|..|..|...:...|.:.|:|.||.:| .||:.|:.:::..|..||||||||||.||:.
  Rat   274 RRRALPSQHEDDILKAKARSKTLDFIDVLLLTKDEDGKELSDEDIRAEADTFMFEGHDTTASGLS 338

  Fly   318 FAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDAT---FQEISTMKHLDLFIKEAQRLYPSVPFIG 379
            :.:|.|:|||:.||:...|..:::    ..|::|   :.:::.:..|.:.|||:.||:|.|..|.
  Rat   339 WILYNLARHPEYQERCRQEVRELL----RDRESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVIS 399

  Fly   380 RFTEKDYVI-DGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREK---PGPFEYVPFSAG 440
            |...:|.|: ||.::|||....:.:....:|..|:.||..:.|.|||.|.   ..|..::|||||
  Rat   400 RRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPENIKDRSPLAFIPFSAG 464

  Fly   441 PRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELVSKDGYISTTLGLQPAEKKSRDAHNHKYDPI 505
            |||||||.||:.|:|..::..:..|.|||  |:                            .:|.
  Rat   465 PRNCIGQTFAMNEMKVALALTLLRFRVLP--DD----------------------------KEPR 499

  Fly   506 LSASMTLKSENGLHLRMK 523
            ....:.|::|.||.||::
  Rat   500 RKPELILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 138/450 (31%)
Cyp4f4NP_775146.1 CYP4F 74..515 CDD:410772 140/479 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348642
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.650

Return to query results.
Submit another query.