DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and Cyp26b1

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001171184.1 Gene:Cyp26b1 / 232174 MGIID:2176159 Length:512 Species:Mus musculus


Alignment Length:527 Identity:123/527 - (23%)
Similarity:203/527 - (38%) Gaps:115/527 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QGPSMLPLVGNAHQMGNTPTEILNRFFGWWHEYGKDNFRYWIGY-------YSNIMVTNPKYMEF 91
            :|....||:|..               |.|...|.       |:       |.|:..|:      
Mouse    51 KGSMGFPLIGET---------------GHWLLQGS-------GFQSSRREKYGNVFKTH------ 87

  Fly    92 ILSSQTLISKSDVYDLTHPWLGLGLLTSTGSKWHKH-RKMITPAFHFNILQDFHEVMNENSTKFI 155
             |..:.||..:...::....||...|.||  :|.:. |.::.|....|.:.|.|    .|..|..
Mouse    88 -LLGRPLIRVTGAENVRKILLGEHQLVST--EWPRSARVLLGPNTVANSIGDIH----RNKRKVF 145

  Fly   156 DQLKKVADGGNIFDFQEEAHYLTLD--VICDTAMGVSINAMENRSSSVVQAFKDITYTIKMRAFS 218
            .:         ||..:....||...  ||.||....|   .:..:.:|.|..:.:|:.:.:|.  
Mouse   146 SK---------IFSHEALESYLPKIQLVIQDTLRAWS---SQPEAINVYQEAQRLTFRMAVRV-- 196

  Fly   219 PWKRNKYLFHFAPEYPEYSKTLKTLQDFTNEIIAKRIEVRKSGLEVGIKADEFSRKKMA------ 277
                   |..|:....:.....:..|.|...:.:..:::..||...||:|.:..:|.:.      
Mouse   197 -------LLGFSIPEEDLGHLFEVYQQFVENVFSLPVDLPFSGYRRGIQARQILQKGLEKAIREK 254

  Fly   278 -----------FLDTLL-SSKVDGRPLTSQELYEEVSTFMFEGHDTTTSGVGFAVYLLSRHPDEQ 330
                       .||.|: |||..|:.:|.|||.:.....:|..:.||.|.....:..|.:||...
Mouse   255 LQCTQGKDYSDALDILIESSKEHGKEMTMQELKDGTLELIFAAYATTASASTSLIMQLLKHPAVL 319

  Fly   331 EKLFNEQCDVMG---ASGLGRDATFQ--EISTMKHLDLFIKEAQRLYPSVPFIGRFTEKDYVIDG 390
            ||| .|:....|   ..|...:.|.:  .:|::::||..|||..||:..|....|...:.:.:||
Mouse   320 EKL-REELRAQGLLHGGGCPCEGTLRLDTLSSLRYLDCVIKEVMRLFTPVSGGYRTVLQTFELDG 383

  Fly   391 DIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDR----EKPGPFEYVPFSAGPRNCIGQKFAL 451
            ..:|||.::...:........||||.:.|.|:||.:    :|.|.|.|:||..|.|.|:|:..|.
Mouse   384 FQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFSQARSEDKDGRFHYLPFGGGVRTCLGKHLAK 448

  Fly   452 LEIKTVVSKI---------IRNFEVLPALDELVSKDGYISTTLGLQPAEKKSRDAHNHKYDP--- 504
            |.:|.:..::         .|.|..:..:..|...||......||        |::.::..|   
Mouse   449 LFLKVLAVELASTSRFELATRTFPRITLVPVLHPVDGLSVKFFGL--------DSNQNEILPETE 505

  Fly   505 -ILSASM 510
             :|||::
Mouse   506 AMLSATV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 113/480 (24%)
Cyp26b1NP_001171184.1 CYP26B1 60..490 CDD:410730 113/486 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4824
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.