DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:581 Identity:136/581 - (23%)
Similarity:240/581 - (41%) Gaps:126/581 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LCAFLALPLFL--VTYF--ELGLLRRKRMLNKFQGPSMLPLVG--NAHQMGNTPTEILNRFFGWW 63
            |...:|:.||:  .||:  ......||.:    :||..||..|  ||.|....|.  :.|...|.
 Worm     3 LSILIAIALFIGVFTYYLWIWSFWMRKGI----KGPRGLPFFGIINAFQSYEKPW--ILRLGDWT 61

  Fly    64 HEYGKDNFRYWIGYYSNIMVTNPKYME--FILSSQTLISKSDVYDLTHPWLG-------LGLLTS 119
            .||| ..:.:..|....::|::|:::.  |:.......::..     :|..|       :.|:||
 Worm    62 KEYG-PMYGFTDGVEKTLVVSDPEFVHEVFVKQFDNFYARKQ-----NPLQGDPDKDPRIHLVTS 120

  Fly   120 TGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLTLDVICD 184
            .|.:|.:.|.:.:|.|....|:.....:.|:..:.:..|:|...||...|..|.....|:|:|..
 Worm   121 QGHRWKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDIIGK 185

  Fly   185 TAMGVSINAM-ENRSSSVVQAFKDITYTIKMRAFSPWKRN----------------KYLFHFAPE 232
            .|||.|.:.| ||            .:..|:||....:.|                ::.|...|.
 Worm   186 IAMGQSGSMMFEN------------PWLDKIRAIFNTRGNIIFIICGIVPFTGSIFRWFFSKVPT 238

  Fly   233 YPEYSKTLKTLQDFTNEIIAKRIEVRKSGLEVGIKADEFSRKKMAFLDTLLSSKVD--------- 288
                ::|:.:|.......:.||:|.|.:..:.||   |.|.:...|:|..|..:.|         
 Worm   239 ----AQTVTSLMHTLEIALTKRVEQRAADEKAGI---ESSGEPQDFIDLFLDVQADTDFLEDETK 296

  Fly   289 -----------GRPLTSQELYEEVSTFMFEGHDTTTSGVGFAVYLLSRHPDEQEKLFNE---QCD 339
                       .:.||..|:..::..|:..|:|||...:.::.|||:|||:.|:||..|   :|.
 Worm   297 NGFARSQIVKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECP 361

  Fly   340 VMGASGLGRDATFQEISTMKHLDLFIKEAQRLYPSVPFI-GRFTEKDYVIDGDIVPKGTTLNLGL 403
                   ..:.||.::|.:|:::..|||..||||....: .|...|...:.|..:.:||.:....
 Worm   362 -------DPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADT 419

  Fly   404 LMLGYNDRVF-KDPHKFQPERF---DREKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRN 464
            ..|.|:.:.: ::.::|:|||:   |.:......|:||..|||.|||.:.|.:|.|.::::|::.
 Worm   420 WTLHYDPKFWGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKK 484

  Fly   465 FEVLPALDELVSKDGYISTTLGLQPAEKKSRDAHNHKYDPILSASMTLKSENGLHLRMKQR 525
            :.              :.||.              ..:.|:....:...:...:||::|.|
 Worm   485 YS--------------LETTF--------------ETHIPLKLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 121/490 (25%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 124/540 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.