DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4e1 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:502 Identity:122/502 - (24%)
Similarity:216/502 - (43%) Gaps:122/502 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GPSMLPLVGNAHQMGNTPTEILNRFFGWWHEYGKDNFRYWI--GYYSNIMVTNPKYMEFILSSQT 97
            |||..|::|:|.:|.::......:...|..:|||   .|.|  |....:::::|..::.:...| 
 Worm    33 GPSGYPILGSALEMLSSENPPYLQLKEWTKQYGK---VYGITEGLSRTLVISDPDLVQEVFVKQ- 93

  Fly    98 LISKSDVYD-----LTHPWLG-------LGLLTSTGSKWHKHRKMITPAFHFNILQDFHEVMNEN 150
                   ||     ..:|..|       :.|.:|.|.:|.:.|.:.:|.|..|.|:.....:.|.
 Worm    94 -------YDNFFGRKLNPIQGDPNKDKRVNLFSSQGHRWKRLRTISSPTFSNNSLRKLKTTVEEC 151

  Fly   151 STKFIDQLKKVADGG---NIFDFQEEAHYLTLDVICDTAMGVSINAMENRSSSVVQAFKDITYTI 212
            :.:.:..:::..|||   ::.||.:|   .|||||...|||.:.:          |.||:.....
 Worm   152 AVELLRHIEQHTDGGQPIDLLDFYQE---FTLDVIGRIAMGQTDS----------QMFKNPLLPY 203

  Fly   213 KMRAFSPWKRNKYLF-HFAPEY-PEYSKTLKTLQDF-----------TNEIIAKRIEVR----KS 260
            ....|...::..:|. ..||.. |.....:.:|.:.           |:..:.:|:::|    |:
 Worm   204 VRAVFGEPRKGLFLSGSLAPWIGPILRMVMFSLPNIVKNPAVHVIRHTSNAVEQRVKLRMADEKA 268

  Fly   261 GLEVGIKADEFSRKKMAFLDTLLSSKVDG-----------------RPLTSQELYEEVSTFMFEG 308
            |::.|...|        |:|..|.:|.|.                 |.||::|:..:...|:..|
 Worm   269 GIDPGEPQD--------FIDLFLDAKSDDVELENNEDFTKAGVKVTRQLTTEEIVGQCFVFLIAG 325

  Fly   309 HDTTTSGVGFAVYLLSRHPDEQEKLFNE---QCDVMGASGLGRDATFQEISTMKHLDLFIKEAQR 370
            .|||...:.::.:||:.||..|:||..|   :|       ...:.||.::|.:|:::..|||..|
 Worm   326 FDTTALSLSYSSFLLATHPKVQKKLQEEIDREC-------ADPEVTFDQLSKLKYMECVIKETLR 383

  Fly   371 LYPSVPFIGRFTEK----------DYVIDGDIVPKGTTLNLGLLMLGYNDRVF-KDPHKFQPERF 424
            :||    :|.....          :|.||     :||.:......|..:..:: :|..:|:|||:
 Worm   384 MYP----LGALANSRCCMRATKIGNYEID-----EGTNILCDTWTLHSDKSIWGEDAEEFKPERW 439

  Fly   425 DR------EKPGPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNF 465
            :.      :|.|   |:||..|||.|||.:.|.:|.|.::|.|:|.:
 Worm   440 ESGDEHFYQKGG---YIPFGLGPRQCIGMRLAYMEEKLLLSHILRKY 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 122/502 (24%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 122/502 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.