DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4e1 and Cyp3a9

DIOPT Version :10

Sequence 1:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_671739.2 Gene:Cyp3a9 / 171352 RGDID:708392 Length:503 Species:Rattus norvegicus


Alignment Length:536 Identity:137/536 - (25%)
Similarity:249/536 - (46%) Gaps:91/536 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WIVLCAFLALPLFLVTYFELGLLRRKRMLNKFQGPSMLPLVGNAHQMGNTPTEILNRFFGWWH-- 64
            |::|...|.| |:|......|:.::..:    .||..||.:|.          ||....|:|.  
  Rat    12 WLLLVISLVL-LYLYGTHSHGIFKKLGI----PGPKPLPFLGT----------ILAYRKGFWEFD 61

  Fly    65 -----EYGKDNFRYWIGYYSN----IMVTNPKYMEFILSSQ---TLISKSDVYDLTHPWLG-LGL 116
                 :|||    .| |.|..    :.:|:|..::.:|..:   |..::.:        .| :|:
  Rat    62 KYCHKKYGK----LW-GLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRN--------FGPVGI 113

  Fly   117 L-----TSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHY 176
            |     .|...:|.:.|.:::|.|....|::...::|:.:...:..:::.::.|.....::....
  Rat   114 LKKAISISEDEEWKRIRALLSPTFTSGKLKEMFPIINQYTDMLVRNMRQGSEEGKPTSMKDIFGA 178

  Fly   177 LTLDVICDTAMGVSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHF-APEYPEYSKTL 240
            .::|||..|:.||:::::.|.....|:..|.:   :|...|.|...:..||.| .|.:...:.::
  Rat   179 YSMDVITATSFGVNVDSLNNPQDPFVEKIKKL---LKFDIFDPLFLSVTLFPFLTPLFEALNVSM 240

  Fly   241 --KTLQDFTNEIIAKRIEVRKSGLEVGIKADEFSRKKMAFLDTLLSS-----KVDGRPLTSQELY 298
              :.:.||....:.:..|.|..         |..:::|.||..:::|     |...:.|:..|:.
  Rat   241 FPRDVIDFFKTSVERMKENRMK---------EKEKQRMDFLQLMINSQNSKVKDSHKALSDVEIV 296

  Fly   299 EEVSTFMFEGHDTTTSGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQEISTMKHLDL 363
            .:...|:|.|::||:|.:.|.:|||:.|||.|:||   |.::..|......||:..:..|::||:
  Rat   297 AQSVIFIFAGYETTSSALSFVLYLLAIHPDIQKKL---QDEIDAALPNKAHATYDTLLQMEYLDM 358

  Fly   364 FIKEAQRLYPSVPFIGRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREK 428
            .:.|..||||....:.|..:.|..|:|..:||||.:.:....|..:...:.:|.:|:||||.::.
  Rat   359 VVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPEPEEFRPERFSKKN 423

  Fly   429 P---GPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELV----SKDGYISTTLG 486
            .   .|:.|:||..|||||||.:|||:.:|..:.::::||...|..:..:    ||.|.      
  Rat   424 QDNINPYMYLPFGNGPRNCIGMRFALMNMKVALVRVLQNFSFQPCKETQIPLKLSKQGL------ 482

  Fly   487 LQPAEKK------SRD 496
            ||| ||.      |||
  Rat   483 LQP-EKPLLLKVVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4e1NP_524771.1 CYP4 68..520 CDD:410721 119/463 (26%)
Cyp3a9NP_671739.2 CYP3A 67..492 CDD:410743 118/459 (26%)

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