DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ag5r and AT3G09590

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_187570.1 Gene:AT3G09590 / 820116 AraportID:AT3G09590 Length:186 Species:Arabidopsis thaliana


Alignment Length:198 Identity:45/198 - (22%)
Similarity:68/198 - (34%) Gaps:60/198 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SCPSDATLL----------TLSSAEKDAL---------VARTNEYRNHIAGGLNANLSAACRMAT 89
            |.||...||          .|.::..||:         ..|....|..:....:|.:|:.  :.|
plant     6 SHPSSCLLLLFLLFSGHPSVLGTSIPDAVNTAARLVNRARRAKLSREFLQAHNDARVSSG--VPT 68

  Fly    90 IKWNDELAYLASLNVK----SCQMKHDGCHNTDAFDWSGQNLAWMGYYNPLNVTHYLEWGVDMWY 150
            :.|:.:||..|....|    .|.|.|.|....:...|..:...|    :|..|       |..|:
plant    69 LGWDRDLARFADKWAKQRKSDCSMIHSGGPYGENIFWHRRKKTW----SPEKV-------VTRWF 122

  Fly   151 DEAVYTKQAYIDAYPSNYN--------GPAIGHFTVLVADRNTEVGCAAATYSVSGQSYKAFLLA 207
            :|..            ||:        |...||:|.:|....|.||||    .|...:.:.:|:.
plant   123 EERF------------NYDVKTNTCAPGKMCGHYTQMVWRETTAVGCA----RVKCHNGRGYLVV 171

  Fly   208 CNY 210
            |.|
plant   172 CEY 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 39/173 (23%)
AT3G09590NP_187570.1 CAP_PR-1 50..186 CDD:349400 36/154 (23%)

Return to query results.
Submit another query.