DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ag5r and Crispld1

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:189 Identity:56/189 - (29%)
Similarity:74/189 - (39%) Gaps:31/189 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 AACRMATIKWNDELAYLASLNVKSCQMKHDGCHNTDAFDWSGQNL-AWMGYYNPLNVTHYLEWGV 146
            ||..|..:.|:.||...|....::|..:|.   .|......|||| |..|.|.|..      :.|
  Rat    79 AASNMEYMTWDVELERSAESWAETCLWEHG---PTSLLPSIGQNLGAHWGRYRPPT------FHV 134

  Fly   147 DMWYDEA---VYTKQAYIDAY-PSNYNGPAIGHFTVLVADRNTEVGCA---AATYSVSGQSY-KA 203
            ..||||.   .|..:...|.| |...:||...|:|.:|...::.:|||   ....::.||.: ||
  Rat   135 QAWYDEVRDFSYPYEHECDPYCPFRCSGPVCTHYTQVVWATSSRIGCAINLCHNMNIWGQIWPKA 199

  Fly   204 FLLACNYAAT-NVLGIKMYSSCSKAASKCTTG------TNPKYK-----YLCSAKEEYN 250
            ..|.|||:.. |..|...|.. .|..|.|...      .|..||     |....:||.|
  Rat   200 VYLVCNYSPKGNWWGHAPYKH-GKPCSACPPSFGGGCRENLCYKEGSDQYYTPQEEETN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 42/136 (31%)
Crispld1NP_001128435.1 CAP_CRISPLD1 62..207 CDD:349407 42/136 (31%)
LCCL 291..375 CDD:128866
LCCL 394..491 CDD:427521
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.