DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ag5r and scl-25

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_507364.1 Gene:scl-25 / 188600 WormBaseID:WBGene00011841 Length:212 Species:Caenorhabditis elegans


Alignment Length:200 Identity:42/200 - (21%)
Similarity:72/200 - (36%) Gaps:49/200 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DALVARTNEYRNHIAGGL--NANLSAACRMATIKWNDELAYLASLNVKSCQMKHDGCHNTDAFDW 122
            |.:|...|:.||..:.||  ..::|.:..|..:.||:.|       |...:.:...|...|    
 Worm    32 DNIVFIHNKLRNAASHGLWERHSISKSSNMQLLSWNESL-------VAEAENEKYYCEPAD---- 85

  Fly   123 SGQNLAWMGYYNPLNVTHYLEWGVDMW-YDEAVY------------TKQAYIDAYPSNYNGPAIG 174
             .:||       |:.:      |.::: ||...|            .|..: ||..|.... |..
 Worm    86 -NKNL-------PIKL------GDNIYQYDVNTYDDIDGVGAMGSINKDTH-DALKSEAKA-AKN 134

  Fly   175 HFTVLVADRNTEVGC---AAATYSVSGQSYKAFLLACNYA-ATNVLGIKMYSS---CSKAASKCT 232
            ....::..::..:||   :.......|.:|...||.|.|: ....:..|::..   ||...|..:
 Worm   135 RLRQMLYSKSKSIGCIYESCDKIDSKGINYNTRLLICKYSPPLENIDEKLFDKGEPCSNCPSGTS 199

  Fly   233 TGTNP 237
            .||:|
 Worm   200 CGTDP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 34/168 (20%)
scl-25NP_507364.1 CAP_euk 31..174 CDD:349399 34/168 (20%)

Return to query results.
Submit another query.