DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ag5r and scl-18

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:204 Identity:45/204 - (22%)
Similarity:73/204 - (35%) Gaps:52/204 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NEYRNHIAGG-----LNANLSAACRMATIKWNDEL---AYLASLNVKSCQMKHDGCHN--TDAFD 121
            |..|:.:|.|     .:...:|...:....||..|   ||       |...|:...|:  .|.  
 Worm    46 NNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNATLERSAY-------SFAQKNPSQHSFIPDI-- 101

  Fly   122 WSGQNLAW--------MGYYNPLNVTHYLEWGVDMWYDEAVYTKQAYIDAYPSNYNGPAIGHFTV 178
              |:||.|        ...|.|:....:::...:.::|..:.|...:         |..:||.|.
 Worm   102 --GENLFWHWSTRPGDFNKYGPMAALSWIKEFREKFWDSNILTNDLF---------GSGVGHATQ 155

  Fly   179 LVADRNTEVGCAAATYSV----SGQSYKAFLLACNY-AATNVLGIKMY---SSCSKAAS-KCTTG 234
            :|.....::|||.:.:..    :|:......:.|:| ...|.|...:|   ..|||..| ||...
 Worm   156 MVWADTYQMGCAVSHFKEIHKRTGRPITKICVVCHYWPKGNYLNEPIYLEGPPCSKCESKKCDKR 220

  Fly   235 TNPKYKYLC 243
            |.     ||
 Worm   221 TG-----LC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 33/166 (20%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 33/166 (20%)

Return to query results.
Submit another query.