DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r and scl-1

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:211 Identity:40/211 - (18%)
Similarity:77/211 - (36%) Gaps:43/211 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SSAEKDALVARTNEYRN------HIAGGLNANLSAACRMATIKWNDELAYLASLNVKSCQMKHD- 112
            :|..:.::|...|:.|:      ::|.|.....:...|...:  :..:|..|.....:|...|. 
 Worm    17 TSTGQSSIVDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVV--DSTVAASAQNYANTCPTGHSK 79

  Fly   113 --GCHNTDAFDWSGQNLAWMGYYNPLNVT----HYLEWGVDMWYDEAVYTKQAYIDAYPSNYNGP 171
              |......:.|:..::..:..|..:...    .:.::|   |...|:.|         :.:|. 
 Worm    80 GTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFG---WKSNAMDT---------TLFNS- 131

  Fly   172 AIGHFTVLVADRNTEVGCAAAT--YSVSGQSYKAFLLACNYAAT-NVLGIKMY------SSCSKA 227
            .|||.|.:.....:.:||....  ...|.::.....:.|.|:.. |.:|..:|      |||| .
 Worm   132 GIGHATQMAWANTSSIGCGVKNCGRDASMRNMNKIAVVCQYSPPGNTMGRPIYKEGTTCSSCS-G 195

  Fly   228 ASKCTTGTNPKYKYLC 243
            ::||.|.:.     ||
 Worm   196 STKCDTASG-----LC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 26/166 (16%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 27/169 (16%)

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