DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r and scl-9

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_502497.1 Gene:scl-9 / 186048 WormBaseID:WBGene00009890 Length:213 Species:Caenorhabditis elegans


Alignment Length:220 Identity:46/220 - (20%)
Similarity:81/220 - (36%) Gaps:54/220 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GAWASSCPSDATLLTLSSAEKDALVARTNEYRNHIAGGLNANLS-------AACRMATIKWNDEL 96
            |.|:.:...:..|..|:.         .||:|:.:|.|   .||       :|..|..|.|:.:|
 Worm    14 GVWSDNFSKEGQLNLLNV---------HNEFRSQLALG---QLSFRGVKKPSASMMRKISWSKKL 66

  Fly    97 AYLASLNVKSCQMKHDGCHNTDAFDWSGQNLAWMGYYNPLNVTHYLEWGVDMWYDEAVYTKQAYI 161
            ...|:...::|...|....||      |:::.|....:......|.......|::|         
 Worm    67 TNAATKFAETCPKNHSVVMNT------GESIFWHFSSSLSTPEQYATLAPQKWWNE--------- 116

  Fly   162 DAYPSN------YNGPA----IGHFTVLVADRNTEVGCAAATYSVSGQSYKAFLLACNY-AATNV 215
              :.:|      ||..:    |||...:.....::|||..:..:| |...:..::.|.| ...|:
 Worm   117 --FETNGWDSLIYNHASQRFQIGHAVQMAWHTTSKVGCGYSKCAV-GTPEQTMVVVCRYFQKGNI 178

  Fly   216 LGIKMY------SSCSKAASKCTTG 234
            .|..:|      :.|.:...||.:|
 Worm   179 EGEPIYNEGETCTKCPEEYQKCPSG 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 35/169 (21%)
scl-9NP_502497.1 SCP 23..174 CDD:214553 37/180 (21%)

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