DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r and scl-6

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:193 Identity:42/193 - (21%)
Similarity:73/193 - (37%) Gaps:24/193 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SSAEKDALVARTNEYRNHIAGG---LNANLS-AACRMATIKWNDELAYLASLNVKSCQMKHDGCH 115
            ||:.:..:|...|.:|:.:|.|   :|..|. |...:..:.|:..||..|.....:|.   .|..
 Worm    21 SSSTQQFIVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCP---TGFS 82

  Fly   116 NTDAFDWSGQNLAWMGYYNPLNVTHYLEWGVDMWYDEAVYTKQAYIDAY--PSNYNG-----PAI 173
            ||..   :|:||.|.  ....|::     |:|::...|..:.:.....|  .:||..     ..:
 Worm    83 NTQG---TGENLYWR--TTSANIS-----GLDIYGGAASVSWEQEFQKYGWATNYFSQELFDTGV 137

  Fly   174 GHFTVLVADRNTEVGCAAATYSVSGQSYKAFLLACNYAATNVLGIKMYSSCSKAASKCTTGTN 236
            |:.|.:...:...|||................:.|:|........:|..:.....|:|.|||:
 Worm   138 GNGTQMAWAKTNLVGCGVKNCGKDSTGLNKVAVVCHYKPLGRYVDQMIYTAGFTCSQCPTGTS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 33/162 (20%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 34/165 (21%)

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