DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r and scl-5

DIOPT Version :10

Sequence 1:NP_524770.1 Gene:Ag5r / 44631 FlyBaseID:FBgn0015010 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:231 Identity:51/231 - (22%)
Similarity:81/231 - (35%) Gaps:78/231 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IIFANFL-----LFIISFSGTILNSYLLYKFSTRR---------------GVISGFYKLCLVKTV 51
            :|.||.:     ..|:|:.....||  :|..:.::               |.|:||:...|::..
 Worm   162 VIVANSMHSWGFFVILSWMPIYFNS--VYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRG 224

  Fly    52 PNIVVCACFLIWAVPLGSFRVKNDKVPRDANVFVGQLAGAGSYIFG------PL-------LHVG 103
            .:|.                     :.|.....:| ..|.|..:.|      ||       |.||
 Worm   225 TSIT---------------------LTRKIMQSIG-FIGPGIALIGLTTAKQPLVASAWLSLAVG 267

  Fly   104 MSSNRFSSLYFPIQIMK-ANRYPITTISIGVAFIIAVVFTVIGLPKDCGFLYFPETLEWLSEEAP 167
            :.|  ||.|.|.|.:.: |..|  :.:..|:......:..::|   ..|..:|.|.|        
 Worm   268 LKS--FSHLGFLINLQEIAPEY--SGVLHGMCLTAGTLAAIVG---TVGAGFFVELL-------- 317

  Fly   168 CAIFQYDLLLYSILG--CAVISNSMNLATAGRLLFD 201
             ..||..:||.:||.  .|:..|.  .||..|:.||
 Worm   318 -GSFQGFILLTAILYLLSALFYNI--YATGERVDFD 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5rNP_524770.1 CAP_euk 59..211 CDD:349399 37/159 (23%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 3/12 (25%)

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