DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14630 and tmlhe

DIOPT Version :9

Sequence 1:NP_651985.1 Gene:CG14630 / 44620 FlyBaseID:FBgn0014903 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001096300.1 Gene:tmlhe / 100124877 XenbaseID:XB-GENE-978203 Length:421 Species:Xenopus tropicalis


Alignment Length:439 Identity:113/439 - (25%)
Similarity:192/439 - (43%) Gaps:67/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CRQL-------------ISRLSLLRQA-------------STFACVRLC-----PDYVEVQEEQG 37
            ||:|             :.|..:||.:             ||...|::|     .|::||. ..|
 Frog     3 CRRLACLYPVARALQRHVVRKQVLRSSISHKNVTAVHRWFSTAPDVKVCSWVLHKDHLEVL-YSG 66

  Fly    38 NLLKYPQVWLRDNCQCAECFHAATRARKSHWDRGPLNIPVSQVAYNKERKQLEIIWQDKHRSTFD 102
            ..:::..|||||:|:.|.|::|.|..|.  .|...:::.:.......:...|.:.|.|.|.:.:.
 Frog    67 TCMRFNYVWLRDHCRSASCYNAKTNQRS--LDTATVDLDIQPALVRADETTLYLTWPDGHMTRYG 129

  Fly   103 LGWLRERDFGETGRKHYLEEVYKPPAQLWGKTEFEDVK-REFQYEDVLEQDAALRVWLEALAVQG 166
            |.||.:..:  .|:|..|.:    |..||.:..:::.. ....|.:.|:....||.:|:...:.|
 Frog   130 LEWLVQNSY--EGQKQQLVQ----PRILWNERIYKEANVPSVSYSEFLKTSEGLRAFLQNFLLYG 188

  Fly   167 FAILKGAPNDINVAKKLAERIGYIKRTTYGDVFEVKSKPNARNYAYLMTPLPLHTDMPYYEYKAG 231
            .|.:...|......:::||||.:|:.|.||.::.:.|..:..:.||....|..|||..|::...|
 Frog   189 IAFVDDVPATYEDTERVAERISHIRETIYGKMWNLTSDFSRGDTAYTKLALDRHTDTTYFQEPCG 253

  Fly   232 INILHTLVQSESKGGANTLTDGFNVASQLQKLHPEDFEVLKSVPVNWFDIGHD------GDDSKP 290
            :.:.|.| :.|..||...|.|||..|.|::..:|.|||:|.:||:.     |:      |.::  
 Frog   254 MQLFHCL-RHEGTGGRTLLVDGFYAADQVRHDYPNDFELLSNVPLK-----HEYIENMAGSNN-- 310

  Fly   291 FHSLWRAPVICLDV---DGRFARINQNTTKRDSRFSVSLAQAVSWYKAYDKFL-EIAQSE-AVEF 350
             |.:...||  |:|   :.....|..|...|....:|.......||.|:.:.. |:.:.| .:..
 Frog   311 -HMVGIGPV--LNVYPWNKELYMIRYNNYDRAVISTVPYDIVQQWYIAHRRLTNELRRHENELWV 372

  Fly   351 KTQAGDVFVFNNLRMLHGRTAYEDAPGNKRHLVGAYVDWDIIYSKLRTL 399
            |.:.|.|...:|.|:||||.::.    ..|.:.|.|:..|.:.:..|.|
 Frog   373 KLKPGKVLFVDNWRVLHGRESFT----GYRQICGCYLTRDDVLNTSRLL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14630NP_651985.1 carnitine_bodg 30..400 CDD:274118 102/382 (27%)
DUF971 <41..107 CDD:294847 18/65 (28%)
CAS_like 120..390 CDD:238154 75/281 (27%)
tmlheNP_001096300.1 CAS_like 70..419 CDD:381843 99/371 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D534559at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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