DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SET5

DIOPT Version :9

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:414 Identity:91/414 - (21%)
Similarity:147/414 - (35%) Gaps:130/414 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RGQRILTE-KPFA--------FVLKSQYRLERCDNCL---------------EATKVLKCS-NC- 75
            :||.||.| ||..        |::.:.....||...|               |..|.:.|| .| 
Yeast   135 KGQIILKENKPIVYIPPLDKLFLISNGKACARCGKALYDLTQHKIMVHYLDCEVCKAIWCSEKCK 199

  Fly    76 ----------------------------RYVSYCHRSCQMQAW--------------GQHKHECP 98
                                        |:|:||.:.|...|:              |:.|.:..
Yeast   200 KAHASLHELLYHSWRSNRIDILHAGNWKRFVNYCEKYCFTAAFSVGLIYGSMLLDTTGEVKEQWQ 264

  Fly    99 FLKKVHPRVVPDAARMLCRLILRLEHG----GDLIRG--YYTE----HGSRKFRDLMSHYAEIKN 153
            .|..:..|.         |:.||...|    ..|:.|  .:||    :|::|..:        ||
Yeast   265 KLASISQRE---------RIKLRDASGIGSTFSLLNGTTVHTEEESDNGTKKGVE--------KN 312

  Fly   154 --DPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLITNG-FNILDAEMNSIATAIYLGV 215
              |....|....|..          ...|..:|.:.....|...| |||     |.....:|..:
Yeast   313 IDDETVWEKCYELFC----------GAFPKASEEIDFEKFLTMIGTFNI-----NQYNGQVYHWI 362

  Fly   216 SITDHSCQPNAV--ATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCV 278
            |..:|.|:|||.  ...|..||.:||.:.::  ...:|.|:|::.|:....||.:|:.::.|||.
Yeast   363 SFINHDCEPNAYIEQVEEHEELRLHARKPIK--KGEQIRITYVNPLHGVRLRRRELRVNWGFLCQ 425

  Fly   279 CSKCTDAKESKEMLAALCPN---RNCGAGISVDRNNCPRCDAGISPK----LRNAFNEAMTLTRH 336
            |.:|.:...:.|.:    ||   :|..|.:.|::.:........|.|    .:::..||....:.
Yeast   426 CDRCQNELSTFERV----PNLEKKNADANLGVEKIDSNDSSEDGSKKSTGNRKSSMREAQPDLKE 486

  Fly   337 NLENMKDVAYLDVCKVCLDKQTGV 360
            .|:|.|:.. ||:.:. :|.|..|
Yeast   487 ILKNGKEFE-LDIPET-VDTQGNV 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 zf-MYND 60..97 CDD:280009 15/95 (16%)
TPR_12 377..440 CDD:290160
SET5NP_012077.1 SET 41..526 CDD:225491 91/414 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4564
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12197
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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