DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and ZMYND15

DIOPT Version :9

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001254751.1 Gene:ZMYND15 / 84225 HGNCID:20997 Length:750 Species:Homo sapiens


Alignment Length:174 Identity:36/174 - (20%)
Similarity:52/174 - (29%) Gaps:78/174 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVGSSRSATTSATASACSSKSKNLKNPAPQI-----KRGQRILTEKP-FAFVLKSQYRLERCDNC 63
            |||.:|             ..:.|::..|::     |...|....:| |.|   :..|...|..|
Human   268 TVGDAR-------------LHRELESLVPRLGVKLAKTPMRTWGPRPGFTF---ASLRARTCHVC 316

  Fly    64 ----LEATKVLKCSNCRYVSYCHRSCQMQAWGQ------HKHECPFLKKVHPRVVPDAARMLCRL 118
                .|| |:..|..|..|.||..:|....|.:      |:..||                  ||
Human   317 HRHSFEA-KLTPCPQCSAVLYCGEACLRADWQRCPDDVSHRFWCP------------------RL 362

  Fly   119 ILRLEHGGD---------------------------LIRGYYTE 135
            ...:|..|:                           |.|||:|:
Human   363 AAFMERAGELATLPFTYTAEVTSETFNKEAFLASRGLTRGYWTQ 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 zf-MYND 60..97 CDD:280009 13/46 (28%)
TPR_12 377..440 CDD:290160
ZMYND15NP_001254751.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..199
zf-MYND 313..359 CDD:280009 13/46 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..750
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148804
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.830

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