DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and ASHR2

DIOPT Version :9

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_849991.1 Gene:ASHR2 / 816483 AraportID:AT2G19640 Length:398 Species:Arabidopsis thaliana


Alignment Length:418 Identity:92/418 - (22%)
Similarity:147/418 - (35%) Gaps:138/418 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 APQIKRGQRILTEKPF----AFVLKSQYRLERCDNC---LEATKVLKCSNCRYVSYCHRSCQMQA 89
            |..::.||.||.|.|.    ||...|......||:|   |.::...||.:|..||:|..:|    
plant    28 AQSLRAGQVILRESPLLLYSAFPFLSSSVSPYCDHCFRLLASSAHQKCQSCSLVSFCSPNC---- 88

  Fly    90 WGQHKHECPFLKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKF--RDLMSHYAEIK 152
            :..|   .|:               ||..:.||.....  ..:..:...|:.  |.|:|.|....
plant    89 FASH---TPW---------------LCESLRRLHQSSS--SAFSDQPSDRQVQARFLLSAYNLAA 133

  Fly   153 NDPMRLEHL------------------DS-----LHAVLTDMMAESPSTV-PNKTELMSIYGRLI 193
            ..|...:.|                  ||     ||::|:.:....|.:: |:.|  .::..:..
plant   134 ASPSDFQILLSLQGSGSSNGDPSCSAGDSAAAGFLHSLLSSVCPSLPVSISPDLT--AALLSKDK 196

  Fly   194 TNGFNILDA-----EMNSI-ATAIYLGVSITDHSCQPNAV------ATFEGN-ELHVHAIEDME- 244
            .|.|.:::.     |..|: |..||...|..:|.|.|||.      :..:|| ::.:..|.|:. 
plant   197 VNAFGLMEPCSVSNEKRSVRAYGIYPKTSFFNHDCLPNACRFDYVDSASDGNTDIIIRMIHDVPE 261

  Fly   245 ----CLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKC--------------------TDA 285
                ||.:..:.::|     :..|:|  |.|.|.|.|.|.:|                    .|.
plant   262 GREVCLSYFPVNMNY-----SSRQKR--LLEDYGFKCDCDRCKVEFSWSEGEEDENEIMEEMEDQ 319

  Fly   286 KESKEMLAALCPNRN--CGAGISVDRNNCPR--------CD--------AGISPKLRNAFNEAMT 332
            .|.:||..::..|..  ||.|:. |.:|.|.        |:        |.:.||..:|      
plant   320 DEQEEMEDSVGENEEEVCGNGVD-DESNFPHAYFFVRYMCEKENCFGTLAPLPPKTHDA------ 377

  Fly   333 LTRHNLENMKDVAYLDVCKVCLDKQTGV 360
                     ..|...:||....:.:.||
plant   378 ---------SRVLECNVCGSVKEDEVGV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 zf-MYND 60..97 CDD:280009 12/39 (31%)
TPR_12 377..440 CDD:290160
ASHR2NP_849991.1 SET <192..275 CDD:214614 19/82 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 1 1.000 - - FOG0000637
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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