DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and SDG37

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_849969.2 Gene:SDG37 / 816300 AraportID:AT2G17900 Length:485 Species:Arabidopsis thaliana


Alignment Length:457 Identity:123/457 - (26%)
Similarity:214/457 - (46%) Gaps:33/457 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 APQIKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLKCSNCRYVSYCHRSCQMQAWGQHKHE 96
            |...:.|:.||::||:..|..:.....|||.|.:...:.|||.|:.|.||..|||...|..|:.|
plant    33 ARDFRPGEVILSQKPYICVPNNTSSESRCDGCFKTNNLKKCSACQVVWYCGSSCQKSEWKLHRDE 97

  Fly    97 CPF---LKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRL 158
            |..   |:|...:.|....|::.||.::.....:.:....|.........|:||.:||....|.|
plant    98 CKALTRLEKEKRKFVTPTIRLMVRLYIKRNLQNEKVLPITTTDNYSLVEALVSHMSEIDEKQMLL 162

  Fly   159 EHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATAIYLGVSITDHSCQ 223
            .   :..|.|.:::.:.||.  :..|:...:.:...|..:|.|:|:......::..|||.:|||.
plant   163 Y---AQMANLVNLILQFPSV--DLREIAENFSKFSCNAHSICDSELRPQGIGLFPLVSIINHSCS 222

  Fly   224 PNAVATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCT----- 283
            ||||..||.....|.|::::.  ..|:|.||||:...:...|:..|||.|.|.|.|::|:     
plant   223 PNAVLVFEEQMAVVRAMDNIS--KDSEITISYIETAGSTLTRQKSLKEQYLFHCQCARCSNFGKP 285

  Fly   284 -DAKESKEMLAALCPNRNCGAGISVDRNN----CPRC--------DAGISPKLRNAFNEAMTLTR 335
             |.:||..:....|.|..|...:..|...    |.:|        ...::..|:....:|.  |.
plant   286 HDIEESAILEGYRCANEKCTGFLLRDPEEKGFVCQKCLLLRSKEEVKKLASDLKTVSEKAP--TS 348

  Fly   336 HNLENMKDVAYLDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFR 400
            .:.|:.:  |.:::.|.....|..::|..::..::|.:...:..::|..|.:||:|.:.::|.::
plant   349 PSAEDKQ--AAIELYKTIEKLQVKLYHSFSIPLMRTREKLLKMLMDVEIWREALNYCRLIVPVYQ 411

  Fly   401 KYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYMLVLQARQ 465
            :.:...:||:||.....||::...|.:|||:..|.:|..||.::||.....:.| |...:.:||.
plant   412 RVYPATHPLIGLQFYTQGKLEWLLGETKEAVSSLIKAFDILRISHGISTPFMKE-LSAKLEEARA 475

  Fly   466 EA 467
            ||
plant   476 EA 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 76/258 (29%)
zf-MYND 60..97 CDD:460312 15/36 (42%)
TPR_12 <383..441 CDD:315987 17/57 (30%)
SDG37NP_849969.2 SET 24..281 CDD:394802 77/254 (30%)
zf-MYND 61..98 CDD:460312 15/36 (42%)
TPR_12 <396..453 CDD:315987 18/56 (32%)

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