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Protein Alignment Smyd3 and Smyd3

DIOPT Version :9

Sequence 1:	NP_524768.2	Gene:	Smyd3 / 44554	FlyBaseID:	FBgn0011566	Length:	468	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	444	Identity:	127/444 - (28%)
Similarity:	215/444 - (48%)	Gaps:	43/444 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 SSKSKNLKNPAPQIKRGQRILTEKPFAFVLKSQYRLERCDNC-LEATKVLKCSNCRYVSYCHRSC 85
            :::...|:..|| ::.|:.:....|.|:.:....|...||.| |...|:::||.||...||...|
Mouse    12 ANRGNGLRAVAP-LRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRIAKYCSAKC 75

  Fly    86 QMQAWGQHKHECPFLKKVHPRVVPDAARMLCRLILRL--EHGGDLIRGYYTEHGSRKFRDLMSHY 148
            |.:||..|:.||..||...||..||:.|:|.|:|::|  |...:..:.|       .|.||.|:.
Mouse    76 QKKAWPDHRRECSCLKSCKPRYPPDSVRLLGRVIVKLMDEKPSESEKLY-------SFYDLESNI 133

  Fly   149 AEIKNDPMRLEHLDSLHAVLTDMMAE---SPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATA 210
            :::..|  :.|.|..|.......|.|   ..|.:|...:|...:.::|.|.|.|.:|||..:...
Mouse   134 SKLTED--KKEGLRQLAMTFQHFMREEIQDASQLPPSFDLFEAFAKVICNSFTICNAEMQEVGVG 196

  Fly   211 IYLGVSITDHSCQPNAVATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYF 275
            :|..:|:.:|||.||....|.|..|.:.|:.::|.  ..::.|.|:|:|.|.|:||..|::.|.|
Mouse   197 LYPSMSLLNHSCDPNCSIVFNGPHLLLRAVREIEA--GEELTICYLDMLMTSEERRKQLRDQYCF 259

  Fly   276 LCVCSKCTDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLEN 340
            .|.|.:|....:..:||..                     |..|..:::.:..:...|..|
Mouse   260 ECDCIRCQTQDKDADMLTG---------------------DEQIWKEVQESLKKIEELKAH---- 299

  Fly   341 MKDVAYLDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFRKYHGP 405
            .|....|.:|:..::..:.....:|::.:|.||.|.:|.|.:|...:||.|..|.:..:|.:...
Mouse   300 WKWEQVLALCQAIINSNSNRLPDINIYQLKVLDCAMDACINLGMLEEALFYAMRTMEPYRIFFPG 364

  Fly   406 WNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYML 459
            .:|:.|:..||:||:||::|...:|:.:|..|..|:.|||||:|.|:.:.:.:|
Mouse   365 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMKVTHGREHSLIEDLILLL 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.