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Protein Alignment Smyd3 and Zmynd15
DIOPT Version :9
Sequence 1: | NP_524768.2 |
Gene: | Smyd3 / 44554 |
FlyBaseID: | FBgn0011566 |
Length: | 468 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099270.1 |
Gene: | Zmynd15 / 287457 |
RGDID: | 1309845 |
Length: | 738 |
Species: | Rattus norvegicus |
Alignment Length: | 152 |
Identity: | 30/152 - (19%) |
Similarity: | 46/152 - (30%) |
Gaps: | 63/152 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KNLKNPAPQI-----KRGQRILTEKP-FAFVLKSQYRLERCDNCLE---ATKVLKCSNCRYVSYC 81
:.|::..|:: |...|....:| |.| :..|...|..|.: ..|:..|..|..|.||
Rat 272 RELESLVPRLGVKLAKTPMRTWGPRPGFTF---ASLRARTCHVCHKHSFEVKLTPCPQCSAVLYC 333
Fly 82 HRSCQMQAWGQ------HKHECPFLKKVHPRVVPDAARMLCRLILRLEHGGD------------- 127
..:|....|.: |:..|| ||...:|..|:
Rat 334 GEACLQADWRRCPDDVSHRFWCP------------------RLAAFMERAGELASLPFTYTAEVT 380
Fly 128 --------------LIRGYYTE 135
|.|||:|:
Rat 381 SETFNKEAFLASRGLTRGYWTQ 402
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Smyd3 | NP_524768.2 |
zf-MYND |
60..97 |
CDD:280009 |
11/45 (24%) |
TPR_12 |
377..440 |
CDD:290160 |
|
Zmynd15 | NP_001099270.1 |
zf-MYND |
309..355 |
CDD:280009 |
11/45 (24%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342697 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.830 |
|
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