DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and Smyd5

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:384 Identity:89/384 - (23%)
Similarity:140/384 - (36%) Gaps:131/384 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SSKSKNLKNPAPQ-IKRGQRILTEKPFA---FVLKSQYRLERCDNCLEA---------------T 67
            |.|.|.|.  |.| |::|:.|..|:|..   |:..:.|:...||:||.|               :
Mouse    30 SIKGKGLF--ATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEKAEENAQRLTGKPS 92

  Fly    68 KVL--------------KCSNCRYVSYCHRSCQMQAWGQ-HKHECP---------------FLKK 102
            ::|              .|.:|: |.||...|::.|..| |:..||               ..:.
Mouse    93 QILPHPELCSVRKDLHQNCPHCQ-VMYCSAECRLAAAEQYHQILCPGPSHDPRHPLNKLQEAWRS 156

  Fly   103 VHPRVVPDAA--RMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEH----- 160
            ||  ..|:.|  .::.|::..::...|      .:|..|.|....|..|   |....:.|     
Mouse   157 VH--YPPETASIMLMARMVATVKQAKD------KDHWVRLFNHFCSRTA---NQEQAIVHKLLKG 210

  Fly   161 -----LDSLHAVLTDMMAESPSTVPNKTE-LMSIYGRLITNGFNI-------------------- 199
                 |:.|..:..:.:.|...::....| ..|::..:.|||..|                    
Mouse   211 KFKDQLELLLGLFKEALYEEALSLWFTPEGFRSLFALVGTNGQGIGTSSLSQWVHACDALELTPQ 275

  Fly   200 ----LDAEMNSI------ATAIYLGV---------SITDHSCQPNAVATFEGNE--LHVHAIEDM 243
                ||..::.:      ||..:|..         |..:|||.|||..:|..|.  |||.|:||:
Mouse   276 DREQLDTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFVLHVTALEDI 340

  Fly   244 ECLDWSKIFISYIDLL---NTPEQRRLDLKEHYYFLCVCSKC---------TDAKESKE 290
            :  ...:|.|||:|..   .:...|...|:|:|.|.|.|.||         |..:|.:|
Mouse   341 K--PGEEICISYLDCCQRERSRHSRHKILRENYLFNCSCPKCLAEADDPNVTSEEEEEE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 81/364 (22%)
zf-MYND 60..97 CDD:460312 15/66 (23%)
TPR_12 <383..441 CDD:315987
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 86/368 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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