DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and Smyd3

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061511104.1 Gene:Smyd3 / 1279922 VectorBaseID:AGAMI1_011343 Length:458 Species:Anopheles gambiae


Alignment Length:439 Identity:215/439 - (48%)
Similarity:278/439 - (63%) Gaps:11/439 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLKCSNCRYVSYCHRSCQMQAWGQHKHECPFL 100
            :||..||.|||||.||..:||..|||.|.:.|||:|||||.||.||.||||.:||..||.||..|
Mosquito    10 RRGDVILQEKPFACVLDPRYRDTRCDRCFKETKVMKCSNCLYVRYCGRSCQKEAWSDHKEECEKL 74

  Fly   101 KKVHP-RVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLDSL 164
            |.:.| .|||.||.|:.|::.||..|||..:||||....|||.|||.|...|:.|..|:||..:|
Mosquito    75 KALPPGLVVPSAALMIARIVRRLLKGGDTHKGYYTSKQYRKFCDLMPHEENIRADSKRMEHFGTL 139

  Fly   165 HAVLTDMMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATAIYLGVSITDHSCQPNAVAT 229
            :.||..::.|  ::.|.|.||:.|||::..|.||||||||::|.|.:|:|.||.||||:||.|.:
Mosquito   140 YVVLQRLLDE--ASRPTKAELLRIYGKMCINTFNILDAEMSTIGTGMYIGASIIDHSCRPNVVVS 202

  Fly   230 FEGNELHVHAIEDM--ECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAKESKEML 292
            |:|..|.:..:||.  :.||:.|:|||||||::|.|.||..|.|.|||.|.|.:|.|.:|.|.|.
Mosquito   203 FDGETLRMRLLEDYPEQELDFGKLFISYIDLIDTTEVRREQLAERYYFHCACERCRDEQEQKRMN 267

  Fly   293 AALCPNRNCGAGI----SVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLENMKDVAY--LDVCK 351
            ||.|||..|...:    |...|.||.|...::...|.||.|..:.||.:|..||.||.  |||.:
Mosquito   268 AAACPNTTCHEPLDFSDSEQLNQCPACGTAVTHSDREAFAEISSFTRDHLAQMKSVASTDLDVSR 332

  Fly   352 VCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHMK 416
            :|||||..|.|..||.::||||.|.|:|:.:.||.:|..||.|||.|||:|:.|::|||||.::|
Mosquito   333 LCLDKQANVLHRYNVHHIKTLDNAMESALSLEKWPEATGYGLRLLDGFRQYYSPYHPLLGLTYLK 397

  Fly   417 LGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYMLVLQARQ 465
            :||:|||:....|||..|::|.:||.||||....|....|..|:..|.|
Mosquito   398 VGKLQLYQCQFTEALKQLQQAAKILRVTHGEQDDLYKRVLVPLLCDAAQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 130/250 (52%)
zf-MYND 60..97 CDD:460312 23/36 (64%)
TPR_12 <383..441 CDD:315987 29/57 (51%)
Smyd3XP_061511104.1 None

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