DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd3 and LOC1270667

DIOPT Version :10

Sequence 1:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061511730.1 Gene:LOC1270667 / 1270667 VectorBaseID:AGAMI1_003193 Length:615 Species:Anopheles gambiae


Alignment Length:399 Identity:86/399 - (21%)
Similarity:149/399 - (37%) Gaps:80/399 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QIKRGQRILTEKPFAFVLKSQYRLERCDNC--LEATKVLKCSNCRYVSYCHRSCQMQAWGQ-HKH 95
            ::|.|..::.|:||..|||..:|..|||.|  .....::.|..|....||...|..:|:.. |::
Mosquito   232 KLKVGDVVMIERPFVTVLKDSFRYVRCDFCHGERPFTLIPCEGCTAAMYCSEECLSKAYNNYHRY 296

  Fly    96 ECPFLKKVH---PRVVPDAARMLCRLILRLEHGGDLIR------------GYYTEHGSRKFRDLM 145
            :|..|:.::   ..|.....||:...|...::..:.::            |:..:......:|:.
Mosquito   297 DCGLLRDLYEDFEEVSLIDIRMIAIAITTFDNNPEALKDHLDALDESNVNGFTMDWNKATQQDIF 361

  Fly   146 S--HYAEIKND-------PMRLEHLDSLHAVLTD------MMAESPSTVPNKTELMSIYGRLIT- 194
            :  |......:       .|.:.:...||.::.:      :...:|:|.....:|:..|.:::. 
Mosquito   362 NTVHVLTTNQERRHSMFVAMFIFNATILHTLILERTELGPVCEANPATNKFLLDLILRYMQIVNC 426

  Fly   195 -------NGFNILDAEMNSIATAIYLGVSITDHSCQPNAV-ATFEGNELHVHAIEDMECLDWSKI 251
                   |.:.:.:....|.|...|..:|:.:|||.||.. .|.......|..|..:  |:.|::
Mosquito   427 NRKLLSFNAYKVKEYVAESFAVGCYPLISMLNHSCAPNVKRITLRDGRCAVFVIRPV--LEGSQL 489

  Fly   252 FISYI--DLLNTPEQRRLDLKEHYYFLCVCSKCT-------------DAKESKEMLAALCPNRNC 301
            |.||.  ..|:..|.|:..|...|.|.|.|..||             |...|:.|...|..||. 
Mosquito   490 FDSYEAGHTLHEREMRQSMLSFVYSFQCTCEACTFNYPTLKVLLEGSDVINSENMTKHLYYNRM- 553

  Fly   302 GAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLENMKDVAYLDVCKVCLDKQTGVFHPLNV 366
               :|...:...|   .|..:||:..||...|...:             :||. :|......|.|
Mosquito   554 ---LSSHEDKKVR---KIMAELRSFLNETPKLYPES-------------EVCF-RQVEFVRSLQV 598

  Fly   367 WYVKTLDAA 375
            .|.:|.:.|
Mosquito   599 LYNQTSENA 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd3NP_524768.2 SET 34..284 CDD:394802 64/306 (21%)
zf-MYND 60..97 CDD:460312 10/39 (26%)
TPR_12 <383..441 CDD:315987
LOC1270667XP_061511730.1 None
Blue background indicates that the domain is not in the aligned region.

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