DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and klhl35

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_699490.4 Gene:klhl35 / 570873 ZFINID:ZDB-GENE-091118-66 Length:568 Species:Danio rerio


Alignment Length:101 Identity:22/101 - (21%)
Similarity:48/101 - (47%) Gaps:2/101 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY--DKHPIFILKDV 76
            |...::.|.::...:.|..|..|..:|.....|:..|.|.|.:|.|:....:  .:.....|:||
Zfish    23 HAEHILQVLNSYRRSGTFTDVVLLVDGCEFPCHRATLCASSGFFRTMFGSHFTESRQAAVTLQDV 87

  Fly    77 KYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQI 112
            ....:..::|:||.|.:.:.::.:.::.:||:.|.:
Zfish    88 SRAAMEKLLDFMYEGRLTLDEENVQSVFQAADRLDV 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 19/84 (23%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
klhl35XP_699490.4 BTB_POZ_KLHL35 18..145 CDD:349574 22/101 (22%)
BACK_KLHL35 138..215 CDD:350549
NanM 314..565 CDD:442289
KELCH repeat 328..367 CDD:276965
KELCH repeat 371..414 CDD:276965
KELCH repeat 418..463 CDD:276965
KELCH repeat 466..506 CDD:276965
KELCH repeat 510..552 CDD:276965
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.