DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and lolal

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_524778.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster


Alignment Length:117 Identity:63/117 - (53%)
Similarity:87/117 - (74%) Gaps:0/117 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY 65
            |..||||.|:||:.|:.:::.|..|.:.::..|.|||.||:..||||:|||||||||..||:|..
  Fly     2 MSSDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENP 66

  Fly    66 DKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
            .||||.|||||.|..|:|::::||.||||:||:||.|.||.|:.|::|||::
  Fly    67 SKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 49/82 (60%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
lolalNP_524778.1 BTB_POZ_BAB-like 32..115 CDD:349624 49/82 (60%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.