DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and klhl24b

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_956734.1 Gene:klhl24b / 393412 ZFINID:ZDB-GENE-040426-1185 Length:398 Species:Danio rerio


Alignment Length:106 Identity:24/106 - (22%)
Similarity:49/106 - (46%) Gaps:2/106 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLL--QEQYDKHPIFILKDV 76
            |..:::.:|:...:.....|..::.||:....|:.||||||.||..:.  ..:..:..:..:..:
Zfish    48 HSDSILQMFNEFRDGRLFTDVVISVEGREFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGI 112

  Fly    77 KYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
            :.:.:...:.|:|.|...|:.|.:..|.:.:...||..|.|
Zfish   113 RAEAMDTFLQYVYTGRARITTDNVQFLFETSSLFQISTLRD 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 20/84 (24%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
klhl24bNP_956734.1 BTB_POZ_KLHL24_KRIP6 48..168 CDD:349562 24/106 (23%)
BACK 163..276 CDD:475122
NanM 315..>385 CDD:442289
Blue background indicates that the domain is not in the aligned region.

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