DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and CG15812

DIOPT Version :9

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster


Alignment Length:667 Identity:126/667 - (18%)
Similarity:221/667 - (33%) Gaps:214/667 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LRWNNHQSTLISVFDTLLENETLVDCTLAA-EGKFLKAHKVVLSACSPYFATLLQE-QYDKHPIF 71
            |:|..|.||::.:..:|..:....:..||: :|..::||..|||.||.....||.: ...:....
  Fly     4 LKWMGHSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATI 68

  Fly    72 ILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESSGHHRG 136
            :|.|::...|..|:.::|.||.::....|...|:|...|.||..                     
  Fly    69 MLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIKSA--------------------- 112

  Fly   137 GKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSSVLQ 201
                                        :|.....|:||              .:.|..|.|:  
  Fly   113 ----------------------------ISFECNPSASP--------------PSVDVENHSL-- 133

  Fly   202 AAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKT---ESAKLT 263
            |..|.:||   ||..:|.:.|:..:....|.....:...:..|.||..|:...:..   |..|:|
  Fly   134 AVESAKSI---TGLQIAEAELLDDEEEPHPMVSVPATTLAGSQHQPSHSSRSLEYIDVYEPPKIT 195

  Fly   264 SSTAAPASGASASAAVQQAHLHQQQA--QTTSDAINTENVQAQSQG--GAQGVQGDDEDIDEGSA 324
            .|    ......|::..|..|.:...  ..|..|.:...::|...|  ||:...||| |:|...|
  Fly   196 YS----IEHMDGSSSGNQFILTENTGTFTITQSASSLSKIEADETGTSGAEVDLGDD-DVDADLA 255

  Fly   325 VGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYD 389
                                              :.|..|:.::.|...:.....|.:|...|.|
  Fly   256 ----------------------------------EDSEEHESQMIDEEFAQADPLMELEAGTEMD 286

  Fly   390 DDAHDENVEDLTLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQRDPQ 454
            |   |::|.|..:|      ||:|.......||:                        .:.|.|.
  Fly   287 D---DDDVHDQLVD------EEIDDKPRKLGGGK------------------------TRIRRPI 318

  Fly   455 ASKQDKG---------EQTEGAQDEF--ELDDCLLESNDIVITQNKDGFVLHVKKLGNITAAKLE 508
            ::|..|.         :|....:.|.  :::|.|..:.|.||.:.     |.::|    .|.:.:
  Fly   319 SAKAVKRLSDCKPTRIQQFAALKREVKDDINDALDLAADAVIIEG-----LSLQK----AADRFD 374

  Fly   509 ENQAVAQQQGQAAVTVTGPA----GQPTPTITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECE 569
            .::.|..::.:     |.||    .:..|::.|........||             :|..|||.:
  Fly   375 ISKTVLWRRVR-----TNPAYMRNNRERPSLQEAYERLKNGHS-------------LKSISSELQ 421

  Fly   570 LINIKKIIPATTTIATHHPHTSSTIIHPHHII-------------QHVSQEPHH--QEHHQQHQT 619
                   || .:|:..|....|:....|:.:.             ..:::..|.  .|...|:..
  Fly   422 -------IP-MSTLHRHKVRLSAQGRLPNFVSCRKRDNTPKDELRDKLAKAVHACLNEGMSQNHA 478

  Fly   620 IHIEEVPQTSQQHHQQQ 636
            .::.|:|:::...|.|:
  Fly   479 ANLFEIPKSTLWRHLQR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB 22..117 CDD:279045 26/96 (27%)
BTB 33..117 CDD:197585 25/85 (29%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
CG15812NP_523897.2 BTB 20..113 CDD:279045 26/141 (18%)
BTB 35..118 CDD:197585 24/131 (18%)
HTH_psq 348..392 CDD:283007 12/57 (21%)
HTH_psq 458..501 CDD:283007 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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