DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and lov

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster


Alignment Length:436 Identity:106/436 - (24%)
Similarity:182/436 - (41%) Gaps:117/436 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIF 71
            :.|||||||:.::..||.||:.:||||.||......::|||:|||||||:|..:..|...|||:.
  Fly   115 YSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVI 179

  Fly    72 ILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGV---APKPESSGH 133
            :|||.:...::|::|:|||||:::.|.:|..|::|.||||::||.::......   |..|:..|.
  Fly   180 VLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGM 244

  Fly   134 HRGGKLSGAYTLEQTKRARLATGGAM--------------------------DTSGDVSGSRE-G 171
            .....||..:..|.....|.:.||.:                          ::..|:...:| |
  Fly   245 LDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGLRRKREQESDRDLESDQELG 309

  Fly   172 SSSPSRRRRKVRRRSMENDA-HD----NSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGP 231
            .|||..||::.|.|....|. ||    .:::..||....::.:                      
  Fly   310 GSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELL---------------------- 352

  Fly   232 AAGTSSQASSTQQQQPLTSTNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSD-- 294
                 .:|...|::.|   .....:.|:.|::||        .|...|::|...:...:..||  
  Fly   353 -----ERAERDQEEAP---DQDNSQGEAEKISSS--------PAKTLVERAKEQKSMKEEGSDQP 401

  Fly   295 -AINTENVQAQSQGGAQGVQGDDEDID------------------------EGSAVGGPNSATGP 334
             ::|..:.|         ::.||||.|                        :.:|.....:|..|
  Fly   402 RSLNENHHQ---------LELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSP 457

  Fly   335 NPASASASAVHAGVVVKQLASVVD--------KSSSNHKHKIKDNS 372
            ||:...:.........|:...::.        :|::|:..|::||:
  Fly   458 NPSPCLSDGPEDLCTTKKGKELISGPSSSADCESNNNNSSKLQDNN 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 38/82 (46%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 38/82 (46%)
HTH_psq 791..834 CDD:283007
Blue background indicates that the domain is not in the aligned region.

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