Protein Alignment lola and psq

DIOPT Version :10

• Sequence 1: NP_788308.3
• Gene: lola / 44548
• FlyBaseID: FBgn0283521
• Length: 970
• Species: Drosophila melanogaster
• Sequence 2: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Alignment Length: 1295
• Identity: 262/1295 - (20%)
• Similarity: 412/1295 - (31%)
• Gaps: 519/1295 - (40%)

  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHP 69
            |.|.|||||:|:|:.|||..|.|:.:.||.||:.|...||||||||||||.||..||.|...|||
  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72

  Fly    70 IFIL-KDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGL------SDNRTGGGVAPK 127
            ..|| .|:.:.:|:.::|::||||:::::.:|..||:.||.|:||||      :|:......|
  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATA-- 135

  Fly   128 PESSGHHRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAH 192
                            |:..::..:.|..|.:..:..|.|:...|....::..:.:::....:.|
  Fly   136 ----------------TITVSENIQQAVVGNIVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQEQH 184

  Fly   193 D----NSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQ-------Q 246
            .    ::.....|....|.::|.|.|.. :.|..::.||.|..|:|:|...:..||.       |
  Fly   185 QQQQVHAQQQQQQQQQINAALLTQHGVS-SGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQ 248

  Fly   247 PLTSTNVTKKTESAKLTSSTAAPASGASASAAVQQ----AHLHQQQAQTTSDAINTENVQAQSQG 307
            |....:..|:::|..|:|...|.:||.|:|.:.||    ||.|..|         |..:|.|:..
  Fly   249 PTPRKSRLKRSKSPDLSSGGGAGSSGGSSSGSTQQQPQPAHHHHPQ---------TILIQGQNPN 304

  Fly   308 GAQGVQ-------------GDDEDIDE---------GSAVGGPNSATGPNPASASASAVHAGVVV 350
            ....:|             |||.|.::         |...||.....|           |:
  Fly   305 SIVSLQQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGGHTHGHG-----------HS---- 354

  Fly   351 KQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQT 415
                   .:.|.:|:|:.|.|.:.          |.|:...:...|                  :
  Fly   355 -------HEHSHDHEHEHKPNKIC----------KTEHSVASPASN------------------S 384

  Fly   416 AGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQDEFELDDCLLES 480
            :..|....|.|...:|.|        .::.|....||        |:.|:
  Fly   385 SSASNNAAGVSGVTSTGQ--------AIVTQIVVARD--------GKDTK--------------- 418

  Fly   481 NDIVITQNKDGFVLHVKKLGNITAAKLEENQA-VAQQQGQAAVTVTGPAGQPTP-TITELLNAAA 543
                                |:|:..:..|.. :....|....|...||...|| |:||.::.:.
  Fly   419 --------------------NMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSC 463

  Fly   544 ASHSEPKPTLTT----------------LTSTPIKLPS-------SECELI-NIK-KIIPATTTI 583
            ...::.:....|                |..:|:...|       |...|: :|| ::|.|....
  Fly   464 NPSTDTRDLSNTTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLA 528

  Fly   584 ATHHPHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTIHIE------EVPQTSQQHHQQQHHHQLQ 642
            |.||..:.:...|.||......|:...|:|.||.|.:|.:      ::.|..||..|||.|||.|
  Fly   529 AQHHALSQAQQQHAHHQAHQQHQQHQQQQHQQQQQHLHAQQLLAQSQLQQQQQQQQQQQQHHQQQ 593

  Fly   643 TVQP-----------------THTQV---------QSIITAHPG-----QTINLVGLRNVQL--- 673
            ..|.                 ||..:         .|.|...||     :.:|::...::.:
  Fly   594 QQQAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNS 658

  Fly   674 ---ADSKPIASRIRYSR---------------GKIIGP--------------------------- 693
               .||..||:...:.:               |.:.||
  Fly   659 DTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGSGEKALDAL 723

  Fly   694 TVQNLQI----------------------VET-----------HEPIQHQHHELSDG-------- 717
            ..||:.:                      :||           .:.:|:....|..|
  Fly   724 KNQNMSLTKASAIYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDALQNALEALRSGQISANKAS 788

  Fly   718 --------TKYEIS--------------------------------------------------- 723
                    |.|:|:
  Fly   789 KAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTL 853

  Fly   724 ---------EIDLNNPNA---------------------SAAIISDL--------VKYAEIDDIE 750
                     |:..:||..                     .|||..:|        .|..:.|.:.
  Fly   854 YGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVA 918

  Fly   751 LPDGTKI----GIGFAPSEITEHMQTSGGE------------THITTIEHE---------PQELQ 790
            ...|..:    |......||.||.|.:..:            .|.:|.:|.         ||.:|
  Fly   919 NTSGVALLNTSGNTTGSIEIIEHSQENSQQFPYSPSPHPPTPQHHSTPQHHSSAQQGPPTPQHMQ 983

  Fly   791 --TVH--QHEQTQQTHHIHAGQLQTHHIQTVVQSSS----GQQQHDQQQHHQHHSIELQDDD--- 844
              .||  |.:|.||....|.|....|..|.||.|||    .|||...||.:|||....:. :
  Fly   984 QHVVHMQQQQQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERSXESLH 1048

  Fly   845 -----------------GVETITPEELGMHDSSKSYTILT------------------------- 867
                             ||...|.:  |...||..:..::
  Fly  1049 AATLMGSTGGGGGGGVGGVAASTSD--GTAASSTPFASISALVSGPSSAPPPPVTASGSSAVSGG 1111

  Fly   868 -------TRPMKEESEHDPSGMTYELSLSDSSLGPCDDPESRYVCRHCGKKYRWKSTLRR 920
                   .:..: |.|.|......|   :.:.:...:|.:.|:.|:|      ||..||:
  Fly  1112 TSKRKKANKQKRXEQEDDQPHRELE---TIAGVARPEDIKFRFNCKH------WKRKLRQ 1162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lola	NP_788308.3	BTB_POZ_BAB-like	31..114	CDD:349624	41/83 (49%)
		C2H2 Zn finger	905..925	CDD:275368	6/16 (38%)
		zf-H2C2_5	935..957	CDD:404746
		C2H2 Zn finger	935..955	CDD:275368
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	41/83 (49%)
		HTH_psq	717..>747	CDD:283007	2/29 (7%)
		HTH_psq	767..804	CDD:283007	6/36 (17%)
		HTH_psq	821..866	CDD:283007	1/44 (2%)
		HTH_psq	873..916	CDD:283007	5/42 (12%)