DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and br

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_061497249.1 Gene:br / 3290570 VectorBaseID:AGAMI1_003202 Length:688 Species:Anopheles gambiae


Alignment Length:750 Identity:172/750 - (22%)
Similarity:284/750 - (37%) Gaps:220/750 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY 65
            |.|.|.|||||||:||::.|.|:.|.::|..||.|||.:|:.||||:|||||||.||..||:...
Mosquito     1 MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSTYFRELLKSTP 65

  Fly    66 DKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPES 130
            .|||:.:|:||.:.:|.|:::::|.||||:.|..|::.||.||.|::.||:..:.       .|:
Mosquito    66 CKHPVIVLQDVAFTDLHALVEFIYHGEVNVHQRSLSSFLKTAEILRVSGLTQQQA-------EET 123

  Fly   131 SGHHR--GGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHD 193
            .|.|.  |..|............::     :|.|..||   :|:|.|.      ...|:.|.:..
Mosquito   124 HGMHASLGANLPSGVVHHPIYPEKM-----LDDSLYVS---QGASPPP------HLSSLHNSSSP 174

  Fly   194 NS------NSSVLQAAASNQSILQQTGAGLAV------------SALVTTQL---SSGPA----- 232
            ||      ||:...|...|| :|::..|..|:            .||...::   |:||.     
Mosquito   175 NSGGVGGGNSNGGGAPMVNQ-LLKRAAAAAALRRERNNSVHSDEMALKRHRMSVDSNGPTNPRDH 238

  Fly   233 --------AGTSSQASSTQQQQPLTSTNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQA 289
                    ..|::..||:..:|.|:..:...|.:..:..|.:....||:::.:....::|.:...
Mosquito   239 LDVICSTPQTTATDFSSSAAKQHLSLPSPQGKDQMRQQDSLSGHANSGSNSFSINSASNLIKSSI 303

  Fly   290 QTTSDAINTEN------VQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGV 348
            ...::.||..|      :.::...|..|          |.| ||...:.|..|.|...|      
Mosquito   304 NNNNNNINNNNNLNNNLLHSKENSGVGG----------GGA-GGLCGSGGSMPTSLGTS------ 351

  Fly   349 VVKQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELD 413
                     :.|::......:..|::|..||.                      ..||:..|.|:
Mosquito   352 ---------NGSNAGSLCSAEKESLASSPSER----------------------SAEDVKSEPLE 385

  Fly   414 QTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQD--------- 469
            ...||  ||:          |:.|.|.:               ..|.|:..:|..|         
Mosquito   386 LLCGT--GGD----------HENSSDSV---------------TDDHGDLVKGGLDVKGSLRSPN 423

  Fly   470 EFELDDCL-----------LESNDIVITQNKDGFVLHVKKLGNITAAKLEENQAVAQQQGQA--A 521
            :.||:..:           ...|.:..|.....|.:         ||...:..|:|....||  |
Mosquito   424 DHELESSMHHHSGAQFLMNASENKLFPTPPSFNFSM---------AALAADPSALAGFSTQALQA 479

  Fly   522 VTVTGPAGQPTPTITELLNAAAASHSEPKPT------------------LTTLTSTPIKLPSSEC 568
            |.:.|     :|....:..:.|||.....|.                  :..|:   :.||.:.|
Mosquito   480 VELAG-----SPQGMSIAASMAASQRSASPPDGGGGGGGGGSSVHGGHGMNRLS---LPLPLAAC 536

  Fly   569 ELINI-KKIIPATTTIATH------HPHTSSTIIHPHHIIQHVSQEPHHQE-HHQQHQTIHIEEV 625
            ...:: .|::....|:..|      .|..::.....|.:.:.::...:|:. :|::.:.:|    
Mosquito   537 HRCDVCGKLLSTKLTLKRHKEQQHLQPLNNAVCNLCHKVFRTLNSLNNHKSIYHRRQKILH---- 597

  Fly   626 PQTSQQHHQQQHHHQLQTVQPTHTQVQSIITAHPG 660
                  ||...|||      |.|.|....:...||
Mosquito   598 ------HHHHAHHH------PLHGQHPFAVGGGPG 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 41/82 (50%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
brXP_061497249.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.