DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and CG8924

DIOPT Version :9

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:653 Identity:149/653 - (22%)
Similarity:227/653 - (34%) Gaps:232/653 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHP 69
            |:||:|||:|..::.:.|..||..:..||.|||.||:.:..|::||:|||.||..:|.|...|||
  Fly     6 QEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKHP 70

  Fly    70 IFIL-KDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESSGH 133
            :.|| :::|..|::|::|:||:||||::|..|..||:.||.|||:||                  
  Fly    71 VIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGL------------------ 117

  Fly   134 HRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSS 198
                                                .||.:|. ..:|:::.|:|          
  Fly   118 ------------------------------------YGSEAPI-NYKKLQQASLE---------- 135

  Fly   199 VLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKTESAKLT 263
                ||.:                        |||.|:.........:  |....|..|.|..:|
  Fly   136 ----AAKD------------------------PAATTARSFKHVDSAE--TDDAATNSTTSTTMT 170

  Fly   264 SSTAAP----------ASGASASAAVQQAHLHQQQAQTTSDAINTENVQAQSQGGAQGVQGD--- 315
            :|:|.|          ....:..|..||....|||.|.... ||..|.|..|:..:..|.|.   
  Fly   171 TSSAPPLPVNHQQPTVLKRQNPDARQQQQQQQQQQVQQRPQ-INGSNAQQPSKATSTNVLGSHSN 234

  Fly   316 --DEDIDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGS 378
              .|| |.|..|....:|.|......:.|           |..||...:.|....:......:..
  Fly   235 APTED-DSGDEVPNNWNAYGEQFDDCNIS-----------AQAVDNKMNVHLSLQQARMQMQLQQ 287

  Fly   379 EMVIEPKAEYDDD---AHDENVE-------------DLTLDEEDMTMEELDQTAGTSQG-GEGSS 426
            :..::...|.|.:   |||||.:             .|:||      .:||.:|.||.| ...|.
  Fly   288 QQYLDSNVEDDHNYVAAHDENNDSSFATGVPCGSGLSLSLD------TDLDTSANTSGGLSHSSI 346

  Fly   427 QTYATWQHDRSQDELGLMAQDAQQRDPQASK-QDKGEQTEGAQDEFELDDCLLESNDIVITQNKD 490
            ..|.:::..| :.|..|         .||:| ..|||..:...:.|.     :..:.|.....:.
  Fly   347 DGYTSYKRVR-RSEASL---------AQAAKCVSKGETFQTVSNMFN-----IPVSTIRFYMARK 396

  Fly   491 GFVLHVKKLGNITAAKLEENQAVAQQQGQAAVTVTGPAGQPTPTITELLNAAAASHSEPKPTLTT 555
            | :|..:|.|.                                         .|||:..    ..
  Fly   397 G-ILPKRKRGR-----------------------------------------GASHAGN----II 415

  Fly   556 LTSTPIKLPSSECELINIKKIIPATTTIATHHPHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTI 620
            :|:...||.:           :||:.|....|||.            |.:..||.|.......::
  Fly   416 ITTNSGKLST-----------VPASITHPPAHPHI------------HTNPLPHTQSQQMSMDSL 457

  Fly   621 HIE 623
            |::
  Fly   458 HLK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB 22..117 CDD:279045 46/95 (48%)
BTB 33..117 CDD:197585 42/84 (50%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
CG8924NP_573091.1 BTB 25..117 CDD:279045 43/91 (47%)
BTB 34..117 CDD:197585 40/82 (49%)
MerR 378..407 CDD:278788 6/75 (8%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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