DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and CG3726

DIOPT Version :9

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster


Alignment Length:577 Identity:143/577 - (24%)
Similarity:221/577 - (38%) Gaps:187/577 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYF-ATLLQEQYDKH 68
            ||:||||..|.|.|.::|..||:.....|.|||.||:.::||:|||.|||.:| |.|.....::.
  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68

  Fly    69 PIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD----NRTGGGVAPKPE 129
            ||.|:|||.:.|::.::::||:||:|:....|.:|||.|:.|:||||::    :...|...|...
  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133

  Fly   130 SSGHHRGGKLSGAYT----------------------------LEQTK-------RARLATG--- 156
            :..|.....|:.:|.                            ||:.:       |.||:.|   
  Fly   134 AEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGMEG 198

  Fly   157 ------------GAMDTS--GDVSG--SREGSS------SPSRRRRKVRRRSMENDAHDNSNSSV 199
                        ||..::  |.|||  |.||.:      .|.|:    |.|...:||:|..|...
  Fly   199 VLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRK----RGRPPLDDAYDVFNVRK 259

  Fly   200 LQAAASNQSILQQTGAGLAVSALVTTQ---------LSSGPAAGTSSQA-----SSTQQQQPLTS 250
            |...|:|....|:  |.|..:...|.:         ::|.|||....|.     ...||||.|.|
  Fly   260 LAQYAANLEPAQR--AYLETARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQS 322

  Fly   251 TNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQ----------TTSDAINTENVQ--- 302
            .:..::..:|....|...| :|::....:.....::|:.:          ||:.:..|:.::   
  Fly   323 ESSDQEQPAAGQDWSNLEP-NGSATPKLLSDGDANKQETEGGDESLPAVLTTASSSGTKKLEKIG 386

  Fly   303 --------------AQSQGGAQGVQGDDEDIDE-------------------------------- 321
                          ...:.|...|....|:.||                                
  Fly   387 ERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTVVIPASFA 451

  Fly   322 -------GSAVGGPNSATG----------------------PNPASASASAVHAGVVVKQLASVV 357
                   .:|.||..|.||                      ||.|||:|:   |.|.|...|:.|
  Fly   452 CKYEGGVTAAGGGSGSGTGSGSLGSSYLINEHGMLMAHEFAPNVASAAAT---AAVAVAAAAAAV 513

  Fly   358 DKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQ 414
            ..:|:.:.:..:|.|.|..|:      .|:|.    |..:||....|..:|.|||.|
  Fly   514 ANASAGNGNGGQDVSGSGTGA------AADYP----DIKLEDYDAAELRLTNEELSQ 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB 22..117 CDD:279045 42/95 (44%)
BTB 33..117 CDD:197585 39/84 (46%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
CG3726NP_001284917.1 BTB 21..118 CDD:279045 42/96 (44%)
BTB 32..121 CDD:197585 39/88 (44%)
HTH_psq 587..622 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.