DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and chinmo

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_061510097.1 Gene:chinmo / 1279925 VectorBaseID:AGAMI1_005508 Length:637 Species:Anopheles gambiae


Alignment Length:583 Identity:135/583 - (23%)
Similarity:208/583 - (35%) Gaps:171/583 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDK 67
            |.||:||:|:|:.|.|.:.|..|.::.||.|.||...|....||||:|:|||..||.|    :::
Mosquito     2 DQQQYCLKWSNYSSNLAAAFSNLFDSATLTDVTLVCGGTVFNAHKVILAACSKNFADL----FER 62

  Fly    68 HPI------FILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAP 126
            .|:      .:|:......:.|::::||:|||::||..|.:.|||||:||:|||:          
Mosquito    63 APVGTGQICVMLEATSADNMHALLEFMYKGEVHVSQKALESFLKAAENLQVKGLT---------- 117

  Fly   127 KPESSGHHRGGKLSGAYTLEQTKRARLATGGAMDTS-GDVSGSREGSSSPSRRRRKVRRRSMEND 190
                                 |:..|.|:..|...| ....|......||:.||::         
Mosquito   118 ---------------------TEHGRFASANASQPSQSPFHGPPNDLPSPAIRRQQ--------- 152

  Fly   191 AHDNSNSSVLQAAASNQSILQQTGA--GLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNV 253
              .||.||.|::.  |:::.::|.:  |.|.|....:...||..||..                 
Mosquito   153 --RNSLSSSLESI--NRAVKRETDSIVGSASSGGNGSSHGSGGGAGAG----------------- 196

  Fly   254 TKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSDAINTENVQAQSQGGAQGVQGDDED 318
                      .:|....|||...:.              :|..|..|.:....||..|       
Mosquito   197 ----------GATGNAGSGADRGSG--------------NDRGNRGNDRGGESGGVGG------- 230

  Fly   319 IDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIE 383
               |...||.....|..|||:.:..:       |.:|.:..|..|.|..::             .
Mosquito   231 ---GGGGGGGGGGGGNTPASSFSPYL-------QPSSYLPGSYENRKRSLR-------------S 272

  Fly   384 PKAEYDDDAHDENVEDLTLDEEDMTMEELDQTAGT-----SQGGEGSSQTYATWQH-DRSQDELG 442
            |..|     |.|...|..|.:...:.......:|:     |..|..::.|.|...| ||...:  
Mosquito   273 PFYE-----HQEATRDSVLRDGKASAGNGSPVSGSKNYRPSSSGSSATPTEADTIHTDRDSPQ-- 330

  Fly   443 LMAQDAQQRDPQASK-QDKGEQTEGAQDEFELDDCLLESNDIVITQNKDGFVLHVKKLGNITAA- 505
             .:...:...|..:. ...|..:....|..|.:|    .|..|     |..|.|..:.||...| 
Mosquito   331 -QSNRYENHSPSTTHGHGNGPVSSNTMDREERND----HNGSV-----DHKVKHESREGNEAGAE 385

  Fly   506 ----KLEENQAVAQQQGQAAVTVTGPAG---------QPTPTITELLNAAAASHSEPKPTLTT 555
                |:|.....:..:..|..|.|.|.|         ...|::..|     ...|.|:.::||
Mosquito   386 DLRVKMEMRPIQSPLRSSAPSTPTTPIGFINVKGGLEAAIPSVDML-----GMISTPRESVTT 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 34/88 (39%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
chinmoXP_061510097.1 None
Blue background indicates that the domain is not in the aligned region.

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