DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and LOC1277466

DIOPT Version :10

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_061515412.1 Gene:LOC1277466 / 1277466 VectorBaseID:AGAMI1_014021 Length:172 Species:Anopheles gambiae


Alignment Length:233 Identity:55/233 - (23%)
Similarity:90/233 - (38%) Gaps:68/233 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKH 68
            |....:.||.....:..||.|....:.|.|..|..||:|:.:||::|::||..|..:..|:.:.:
Mosquito     3 DNNVIIVWNGFSEHVSGVFRTFRHEKALQDVILYCEGQFINSHKLLLASCSEVFRRIFLERANAY 67

  Fly    69 PIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESSGH 133
            .:..|...:|.::..::|::|.||:.:||.||.:|.:||..|:||.|                  
Mosquito    68 HLIRLVGFRYVDVSLLLDFIYNGEMALSQKQLPSLKQAALKLEIKSL------------------ 114

  Fly   134 HRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSS 198
                             |.|.|                  ||.|...:      |.|..|..:| 
Mosquito   115 -----------------ANLVT------------------SPERVSEQ------EADEQDTLSS- 137

  Fly   199 VLQAAASNQSILQQTGAGLA-----VSALVTTQLSSGP 231
               |..:..:.|:.|.||..     ::|:.|.|....|
Mosquito   138 ---ATETTDNNLEVTSAGYVSPLDLMAAVATLQQEEAP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 28/82 (34%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
LOC1277466XP_061515412.1 None
Blue background indicates that the domain is not in the aligned region.

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