DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lola and btbd18

DIOPT Version :9

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_017951392.1 Gene:btbd18 / 100498010 -ID:- Length:602 Species:Xenopus tropicalis


Alignment Length:607 Identity:121/607 - (19%)
Similarity:206/607 - (33%) Gaps:144/607 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DCTL-AAEGKFLKAHKVVLSACSPYFATLL---------------QEQYDKHPIFILKDVKYQEL 81
            |.|| ..||:.:..|..:|:|||||.|.||               |.....| |..:..:....|
 Frog    33 DVTLQGGEGEGVSVHACLLAACSPYLAKLLASVTEVSQLDTDSAIQTDCTGH-ILTVPGIPSCYL 96

  Fly    82 RAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESS---GHHRGGKLSGAY 143
            ..::.|||..|:.::.:.:..:|:||..|||..|...|..||...:||.:   .....|.:...|
 Frog    97 LPLVHYMYTSELEVTPENVHGVLEAARRLQIPELEGLRLEGGRLVRPELARKLNRDCFGSVISQY 161

  Fly   144 TLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRK----VRRRSMENDAHDNSNSSVLQAAA 204
            ..|.      ..|..:.|..:::   .|.:.|.|...:    :.:|:.:.........|:|:...
 Frog   162 ATES------GNGKQIFTKEEIT---SGRNVPVRMHEQGPCILEKRTNKEHTFPADTGSLLRGKM 217

  Fly   205 SNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKTESAKLTSSTAAP 269
            ...|.||    |...:.|:  :::..|   |.....||.|    |.....:..|.|...|.|.  
 Frog   218 EASSSLQ----GNIENPLL--EITKNP---TEKSGPSTVQ----TCFQSRENYECAFQDSGTT-- 267

  Fly   270 ASGASASAAVQQAHLHQQQAQTTSDAINTENVQ--AQSQGGAQGVQGDDEDIDEG-----SAVGG 327
               .:.||..|...:.:..::.....:|.:..:  ..|:.||..|.....|:.:.     .....
 Frog   268 ---QNVSAINQDIEMTKLSSEIPLIVLNPDQKRHILVSEHGADTVPSRKTDMQDKKLFKLQRAYK 329

  Fly   328 PNSATGPNPASASASAVHAGVVVK-------QLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPK 385
            ....||........:.:....::|       .:..:.:...:|.|||...|..|::         
 Frog   330 VRKETGEQATKGKTNIIPLSRIIKLDRGEKQDMPQMDENIKNNFKHKQNHNMNSNL--------- 385

  Fly   386 AEYDDDAHDENVEDLTLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDEL---GLMAQD 447
                      |.:|..|  :.:...:..|.....:..:.|.||.:..|....|..:   .|....
 Frog   386 ----------NPQDSVL--KQVCRNKNSQCTIKLELNDPSIQTQSHIQVCPEQQRIVQSHLEENA 438

  Fly   448 AQQRD---------PQAS--------KQDKGEQTEGAQDEFELDDCLLESNDIVITQNK------ 489
            |.|:|         |.|:        |..|.:.|  ..:.......|||..|::|:..|      
 Frog   439 ALQKDVCVTCVIAKPMANTLLQHKTVKVVKLQHT--GSNVMNTKKILLEERDMIISSQKRTCQGI 501

  Fly   490 ------DGFVLHVKKLGNITAAKLE-----------ENQAVAQQQGQAAVTVTGPAGQPTPTITE 537
                  |.|....|:|  :..:|.|           |:.|.|....:..:.:    .||...:.:
 Frog   502 KRDWCADEFEDKHKEL--VKRSKTENGHWWEEINEVESPAYALSPNEQDMQL----NQPEELVEQ 560

  Fly   538 LLNAAAASHSE-------PKPT 552
            :|:.::.|.||       |.||
 Frog   561 ILSVSSPSSSEVDVGGQSPVPT 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB 22..117 CDD:279045 30/99 (30%)
BTB 33..117 CDD:197585 30/99 (30%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
btbd18XP_017951392.1 BTB_POZ_BTBD18 17..148 CDD:349602 35/115 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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