DRSC/TRiP Functional Genomics Resources

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Protein Alignment lola and Btbd18

DIOPT Version :9

Sequence 1:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:619 Identity:121/619 - (19%)
Similarity:206/619 - (33%) Gaps:197/619 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DCTLAAEGKFLKAHKVVLSACSPYFATLLQEQ---YDKHPIFILKDVKYQELRAMMDYMYRGEVN 94
            |..|.|||:.:.||..:||||||:|...|:.:   ..:..:..:..:|.|.||.::|::|..|:.
Mouse    35 DALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLEMGGLKIQTLRKLVDFLYTSEME 99

  Fly    95 ISQDQLAALLKAAESLQIKGLSDNRTGGG----------------------------VAPKP--- 128
            :||::...:|.||..|::..|...:..||                            |.||.   
Mouse   100 VSQEEAQDVLSAARQLRVSELETLQLEGGKLVKAPQGRRLNRECLQPPAAAPISARVVGPKSRPQ 164

  Fly   129 ---------------------ESSGHHRGGKLSGAYTLEQT---KRARLATGGAMDTSGDVSGSR 169
                                 |..|.|:...|..|.:|..|   |:||:..            ::
Mouse   165 TPLPVTQTPSPLGAVRLKSLGEEEGAHKKTNLPNADSLSDTQLKKKARVCL------------TQ 217

  Fly   170 EGSSSPSRRR----------------------------RKVR--RRSMENDAHDNSNSSVLQAAA 204
            |..||||.:|                            ||:|  |.......:.::.||:|...:
Mouse   218 ESRSSPSSQREGPKETKSNPGPTALPSLYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPS 282

  Fly   205 SNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTST----NVTKKTESAKLTSS 265
            |     ..|..|   ..|...:..|..|.|...|...  :.:||.||    :|.|..|:.|.:..
Mouse   283 S-----MPTAPG---RRLWRQRTVSKEAQGVDKQKPG--EVRPLQSTPDPSDVGKPAENKKQSPE 337

  Fly   266 TAAPASGASASAAVQQAHLHQQQAQTTSDAINTENVQAQSQGGAQGVQGDDEDIDEGSAVGGPNS 330
            ..||.|.:.....|.:..|.:....|..:.:. |.....:|...|.::..|.:...|:.:...|.
Mouse   338 LRAPTSSSVEEGQVGRVKLRKIVNGTCWEVVQ-EPPLRNTQDSPQILEPSDVEEPSGTLLSSVNE 401

  Fly   331 ATGP--------NPASASASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAE 387
            ...|        :|.|            .:|..::..:|.:..|.:..:...|  |.|:...:::
Mouse   402 QEIPARIQLCQDSPES------------PRLQDILLSASHSPDHPMVKSEFGS--SPMLTGKESD 452

  Fly   388 YDDDAHDENVEDLTLDEEDMTMEE--LDQTAGTSQ------------------------GGEGS- 425
            .:.|..:....|.||..:....|:  :...|.||:                        |.||. 
Mouse   453 LNIDCREPYTFDTTLLGQPCEAEQYRITSAAATSELEEIFDFMLCGSDVEPPVGSLESPGAEGCR 517

  Fly   426 ------SQTYATWQHDRS----------QDELGL----MAQDAQQRDPQASKQDKGEQTEG---- 466
                  |:|...|.....          :|..||    ::::.:..:|.:....:.|.||.    
Mouse   518 TPSYHLSETGKNWIEGEEWCLPDMELWPRDLTGLEKEPVSENKEPVEPFSPLVMRSENTESFEPL 582

  Fly   467 ---------AQDEFELDDCLLESNDIVITQNKDG 491
                     :::|..|........:|..:|..||
Mouse   583 SPLVMPSEVSREELSLRGSWTPDLEITSSQPLDG 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lolaNP_788308.3 BTB 22..117 CDD:279045 29/86 (34%)
BTB 33..117 CDD:197585 29/86 (34%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 31/102 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 41/183 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 4/23 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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